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Information on SUBCLASS 4.2.4
Subclass Accession number: 3042
Subclass: 4.2.4 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 6.3 (>75 %)  
GO : GO:0004049 (>75 %)  GO:0016830 (>75 %)  GO:0016833 (>75 %)  GO:0016874 (>75 %)  GO:0016879 (>75 %)  
SCOP : 52171 (>75 %)  
Number of loops: 12

Average sequence ID (%) : 12.4 +/- 16.0
Average RMSD (Å) : 0.892 +/- 0.227

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: hXXpXXXX
(φψ)-conformation: bbaappaa
Pattern: x[cfgiptv][ACGLY][degps]x[adnst]x[enprst]x[aeks][deknq][afikltv]
Conservation:0.533-1.117-0.068-0.620-1.2050.969-0.6530.471-1.0741.0631.925-0.225
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b16_A_561b16   A6071HTYDVTVPVAESEE--TTS-HHHHbxbbaaxxaaaa
1cnu_A_351cnu   A4051HVGGPNATYEDFEE--TT--HHHHbbxxaaxxaaaa
1dlj_A_1581dlj   A160171VSCEENDSPKVKEE--TTS-HHHHbxbbaaxxaaaa
1eg7_A_13771eg7   A13811392INAFPTDTEAELEE--TT--HHHHxxpbaapbaaaa
1jqb_A_11341jqb   A11341145AILPKDMPLENAEE--TTS-HHHHbxxpaaxpaaaa
1luc_A_1911luc   A191201.ILSWIINTHEK.EE-SSS-HHHH.bxxaabxaaaa
1mdb_A_1011mdb   A103114VFALPSHRSSEIEE--TT--HHHHbxxbaaxbaaaa
1mg5_A_571mg5   A6172YPYDVTVPIAETEE--TTS-HHHHbwbbaaxxaaaa
1nij_A_651nij   A6576ICCSRSNELEDAEEE-TTS-HHHHbbbxaaxxaaaa
1qo0_A_2291qo0   A229239.IASLTTSEAEV.EEESS--HHHH.bbbaapbaaaa
1qor_A_1061qor   A107118AILPAAISFEQAEE--TTS-HHHHbxxxaabxaaaa
1r3s_A_2791r3s   A280291VGLDWTVAPKKAEE--TTS-HHHHbxbxaaxxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1b16_A_561b16   A     NAQNICOTINAMIDE ADENINE DINUCLEOTIDE 3-PENTANONE ADDUCT Y - 62
1b16_A_561b16   A     NAQNICOTINAMIDE ADENINE DINUCLEOTIDE 3-PENTANONE ADDUCT D - 63
1b16_A_561b16   A     NAQNICOTINAMIDE ADENINE DINUCLEOTIDE 3-PENTANONE ADDUCT V - 64
1b16_A_561b16   A     NAQNICOTINAMIDE ADENINE DINUCLEOTIDE 3-PENTANONE ADDUCT T - 65
1mg5_A_571mg5   A     NAHNICOTINAMIDE-ADENINE-DINUCLEOTIDE Y - 63
1mg5_A_571mg5   A     NAHNICOTINAMIDE-ADENINE-DINUCLEOTIDE D - 64
1mg5_A_571mg5   A     NAHNICOTINAMIDE-ADENINE-DINUCLEOTIDE V - 65
1mg5_A_571mg5   A     NAHNICOTINAMIDE-ADENINE-DINUCLEOTIDE T - 66
1qo0_A_2291qo0   A     BMDBUTYRAMIDE L - 232
1qo0_A_2291qo0   A     BMDBUTYRAMIDE T - 233
1qor_A_1061qor   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE L - 123
1qor_A_1061qor   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE K - 124
1qor_A_1061qor   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE T - 127
1qor_A_1061qor   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE Y - 130
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1qo0_A_2291qo0   A LGABUTYRAMIDE BINDING SITET - 233

Clusters included in this Subclass
CLUSTER: EH.5.58
CLUSTER: EH.6.188