ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 10.18.1

Subclass Accession number: 5115
Subclass: 10.18.1

Type: HH alpha-alpha
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
GO : GO:0003700 (>50 %)
SCOP : 46688 (>75 %) 46689 (>75 %) 46748 (>75 %)

Number of loops: 3

Average sequence ID (%) : 63.1 +/- -11.1
Average RMSD (Å) : 0.400 +/- 0.100

Consensus geometry

d (Å): 17

delta (°): 135-180

theta (°): 90-135

rho (°): 315-360

Consensus Sequence:	XEXVCpppphPSVS
(φψ)-conformation:	aagabpaaapppaa

Pattern:	[AS]	[W]	[E]	[I]	[R]	[DE]	[KR]	[L]	[IL]	[ARS]	[E]	[GR]	[V]	[C]	[DT]	[NR]	[DS]	[NT]	[AIV]	[P]	[S]	[V]	[S]	[AS]	[I]	[NS]	[R]	[ILV]
Conservation:	-0.704	3.336	0.479	0.003	0.479	-0.084	-0.227	0.003	-0.468	-1.319	0.479	-0.954	0.003	2.384	-0.735	-0.555	-0.651	-0.592	-1.054	1.432	0.003	0.003	0.003	-0.704	0.003	-0.416	0.479	-0.631

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1k78_A_111	1k78	A	111	138	AWEIRDRLLAERVCDNDTVPSVSSINRI	HHHHHHHHHHTTSS-TTTS--HHHHHHH	aaaaaaaaaaavabxaaapxxaaaaaaa
1pdn_C_96	1pdn	C	96	123	SWEIREKLIREGVCDRSTAPSVSAISRL	HHHHHHHHHHTSSS-STT---HHHHHHH	aaaaaaaaaaagabxaaaxxxaaaaaaa
6pax_A_96	6pax	A	96	123	AWEIRDRLLSEGVCTNDNIPSVSSINRV	HHHHHHHHHHTTSS-TTT---HHHHHHH	aaaaaaaaaaavabbaaaxxxaaaaaaa

Clusters included in this Subclass