Logo
Information on SUBCLASS 10.1.1
Subclass Accession number: 8031
Subclass: 10.1.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 14

Average sequence ID (%) : 62.9 +/- 23.9
Average RMSD (Å) : 0.343 +/- 0.191

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 90-135 rho (°): 270-315
Consensus Sequence: SWGXGCApXcpPGV
(φψ)-conformation: abepeblpplbpbb
Pattern: x[lv]x[G][IV][ITV][S][FW][G]x[GQ][C][AG][eqrt]x[DGKN][hknry][FP][G][V][Y][AT][EKRS]
Conservation:-1.266-0.745-1.0051.0990.175-0.3700.3531.4681.099-1.312-0.0302.217-0.187-1.010-1.004-0.664-1.042-0.1111.0990.3531.471-0.120-0.466
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a0j_A_2041a0j   A204226QLQGVVSWGYGCAQRNKPGVYTKEEEEEEEE-SSSS-TT--EEEEEbxabbpabebeblxxvbwxbbxx
1a5h_A_2061a5h   A208230TLVGIISWGLGCGQKDVPGVYTKEEEEEEEE-SSSS-TT--EEEEEbxabbpabebebvxpvbxbxbxx
1a5i_A_2061a5i   A208230TLLGIISWGVGCGEKDVPGVYTKEEEEEEEE-SSSS-TT--EEEEEbxabbpabexebvxpvbxxxbxx
1eax_A_2071eax   A208230FQAGVVSWGDGCAQRNKPGVYTREEEEEEEE-SSSS-TT--EEEEEbxabbpabbxebvxpvbwxbbxx
1ekb_B_2061ekb   B208230LLAGVTSFGYQCALPNRPGVYAREEEEEEEE-SSSS-TT--EEEEEbxabbpabexebvxxlbxxxbxx
1f7z_A_2041f7z   A204226ELQGIVSWGYGCALPDNPGVYTKEEEEEEEE-SSSSBTTB-EEEEEbxabbpabexebvxxvbwxbbxx
1fiz_A_2041fiz   A204226VVVGITSWGVGCARAKRPGVYTSEEEEEEEE-SSSSBTTB-EEEEEbxabbpabexebvbpUbxxxbxx
1fni_A_2041fni   A204226QLQGIVSWGYGCAQKNKPGVYTKEEEEEEEE-SSSS-TT--EEEEEbxabbpabexebvxpvbwxbbxx
1fxy_A_2041fxy   A204226QLQGVVSWGDGCAQKNKPGVYTKEEEEEEEE-SSSSBTTB-EEEEEbxabbpabexebvxxvbwxbbxx
1gj7_B_2061gj7   B208230TLTGIVSWGRGCALKDKPGVYTREEEEEEEE-SSSSBTTB-EEEEEbxabbpabexeblbplbxxbbxx
1hj8_A_2041hj8   A204226ELQGVVSWGYGCAEPGNPGVYAKEEEEEEEE-SSSS-TT--EEEEEbxabbpabexeblxpvbwxbbxx
1hj9_A_2041hj9   A204226KLQGIVSWGSGCAQKNKPGVYTKEEEEEEEE-SSSS-TT--EEEEEbxabbpabebebvxpvbwxbbxx
1kli_H_2061kli   H208230YLTGIVSWGQGCATVGHFGVYTREEEEEEEE-STTT-TT--EEEEEbxabbpabexeblxpvbbxbbxx
1os8_A_2071os8   A208230IQVGIVSWGYGCARPGYPGVYTEEEEEEEEE-SSSS-TT--EEEEEbxabbpabexeblxpvbwxbbxx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a5h_A_2061a5h   A     BBA2,7-BIS-(4-AMIDINOBENZYLIDENE)-CYCLOHEPTAN-1-ONE I - 213
1a5h_A_2061a5h   A     BBA2,7-BIS-(4-AMIDINOBENZYLIDENE)-CYCLOHEPTAN-1-ONE S - 214
1a5h_A_2061a5h   A     BBA2,7-BIS-(4-AMIDINOBENZYLIDENE)-CYCLOHEPTAN-1-ONE W - 215
1a5h_A_2061a5h   A     BBA2,7-BIS-(4-AMIDINOBENZYLIDENE)-CYCLOHEPTAN-1-ONE G - 216
1a5h_A_2061a5h   A     BBA2,7-BIS-(4-AMIDINOBENZYLIDENE)-CYCLOHEPTAN-1-ONE L - 217
1a5h_A_2061a5h   A     BBA2,7-BIS-(4-AMIDINOBENZYLIDENE)-CYCLOHEPTAN-1-ONE Q - 221
1a5h_A_2061a5h   A     BBA2,7-BIS-(4-AMIDINOBENZYLIDENE)-CYCLOHEPTAN-1-ONE V - 224
1a5h_A_2061a5h   A     BBA2,7-BIS-(4-AMIDINOBENZYLIDENE)-CYCLOHEPTAN-1-ONE P - 225
1a5h_A_2061a5h   A     BBA2,7-BIS-(4-AMIDINOBENZYLIDENE)-CYCLOHEPTAN-1-ONE G - 226
1a5h_A_2061a5h   A     BBA2,7-BIS-(4-AMIDINOBENZYLIDENE)-CYCLOHEPTAN-1-ONE V - 227
1a5h_A_2061a5h   A     BBA2,7-BIS-(4-AMIDINOBENZYLIDENE)-CYCLOHEPTAN-1-ONE Y - 228
1a5i_A_2061a5i   A     CH2METHYLENE GROUP I - 213
1a5i_A_2061a5i   A     CH2METHYLENE GROUP S - 214
1eax_A_2071eax   A     BENBENZAMIDINE V - 213
1eax_A_2071eax   A     BENBENZAMIDINE S - 214
1eax_A_2071eax   A     BENBENZAMIDINE W - 215
1eax_A_2071eax   A     BENBENZAMIDINE G - 216
1eax_A_2071eax   A     BENBENZAMIDINE D - 217
1eax_A_2071eax   A     BENBENZAMIDINE K - 224
1eax_A_2071eax   A     BENBENZAMIDINE P - 225
1eax_A_2071eax   A     BENBENZAMIDINE G - 226
1eax_A_2071eax   A     BENBENZAMIDINE V - 227
1eax_A_2071eax   A     BENBENZAMIDINE Y - 228
1ekb_B_2061ekb   B     CH2METHYLENE GROUP T - 213
1gj7_B_2061gj7   B     1326-CHLORO-2-(2-HYDROXY-BIPHENYL-3-YL)-1H-INDOLE-5-CARBOXAMIDINE V - 213
1gj7_B_2061gj7   B     1326-CHLORO-2-(2-HYDROXY-BIPHENYL-3-YL)-1H-INDOLE-5-CARBOXAMIDINE S - 214
1gj7_B_2061gj7   B     1326-CHLORO-2-(2-HYDROXY-BIPHENYL-3-YL)-1H-INDOLE-5-CARBOXAMIDINE W - 215
1gj7_B_2061gj7   B     1326-CHLORO-2-(2-HYDROXY-BIPHENYL-3-YL)-1H-INDOLE-5-CARBOXAMIDINE G - 216
1gj7_B_2061gj7   B     1326-CHLORO-2-(2-HYDROXY-BIPHENYL-3-YL)-1H-INDOLE-5-CARBOXAMIDINE R - 217
1gj7_B_2061gj7   B     1326-CHLORO-2-(2-HYDROXY-BIPHENYL-3-YL)-1H-INDOLE-5-CARBOXAMIDINE K - 224
1gj7_B_2061gj7   B     1326-CHLORO-2-(2-HYDROXY-BIPHENYL-3-YL)-1H-INDOLE-5-CARBOXAMIDINE P - 225
1gj7_B_2061gj7   B     1326-CHLORO-2-(2-HYDROXY-BIPHENYL-3-YL)-1H-INDOLE-5-CARBOXAMIDINE G - 226
1gj7_B_2061gj7   B     1326-CHLORO-2-(2-HYDROXY-BIPHENYL-3-YL)-1H-INDOLE-5-CARBOXAMIDINE V - 227
1gj7_B_2061gj7   B     1326-CHLORO-2-(2-HYDROXY-BIPHENYL-3-YL)-1H-INDOLE-5-CARBOXAMIDINE Y - 228
1hj8_A_2041hj8   A     BAMBENZAMIDINE G - 219
1kli_H_2061kli   H     BENBENZAMIDINE Q - 217
1kli_H_2061kli   H     BENBENZAMIDINE F - 225
1os8_A_2071os8   A     CACALCIUM ION E - 230
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1hj9_A_2041hj9   A S41SO4 BINDING SITE FOR RESIDUE A247K - 204

Clusters included in this Subclass
CLUSTER: HA.9.0