Information on SUBCLASS 5.1.1 |
Subclass Accession number: 8548
Subclass: 5.1.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 34 Average sequence ID (%) : 19.2 +/- 19.0 Average RMSD (Å) : 0.859 +/- 0.318 Consensus geometry
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Consensus Sequence: | XXhpXGpXh |
(φψ)-conformation: | aapbpgpbb |
Pattern: | [afgilptv] | x | [aeknqrst] | x | [acilmtv] | [dehknpqrst] | [adenpqst] | [DGN] | [adegnqrs] | x | [afilmptv] | [agilpvy] | x |
Conservation: | -0.581 | -0.660 | -0.353 | -0.984 | 0.298 | -0.091 | 0.090 | 2.855 | 0.470 | -0.949 | 0.433 | 0.199 | -0.726 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a3w_A_133 | 1a3w | A | 133 | 145 | ITKVISAGRIIYV | HHHH--TT-EEEE | aaaaxbpgxxbxb |
1a8h_*_317 | 1a8h | - | 324 | 335 | LLREIPYGQDTP. | HHHHS-TTS-EE. | aaaabxxgbxbx. |
1az9_*_5 | 1az9 | - | 15 | 27 | LVEQMQPGSAALI | HHHTS-SSEEEEE | aaaaxxxvbbbbb |
1b5p_A_99 | 1b5p | A | 108 | 120 | FQAILDPGDEVIV | HHHH--TT-EEEE | aaaabbpgxbbxb |
1boo_A_253 | 1boo | A | 259 | 271 | IRMLTEPDDLVVD | HHHH--TT-EEEE | aaaabbpvxxbbb |
1bt4_A_76 | 1bt4 | A | 85 | 97 | PMNFLKEGQTANY | HHHH--TT-EEEE | aaaaxbxgbbxxb |
1bw0_A_112 | 1bw0 | A | 121 | 133 | ITAICDAGDYALV | HHHH--TT-EEEE | aaaabbpgxbbxb |
1c4k_A_197 | 1c4k | A | 206 | 218 | TSALVSNGDLVLF | HHHH--TT-EEEE | aaaaxbpgxxbxx |
1c7g_A_99 | 1c7g | A | 107 | 119 | SQLAIKPGQYVAG | HHHH--TTEEEEE | aaaabbpvxbbbb |
1cl1_A_86 | 1cl1 | A | 94 | 106 | ILAFIEQGDHVLM | HHHH--TT-EEEE | aaaaxbpvxbbbb |
1cs1_A_76 | 1cs1 | A | 84 | 96 | TTVFLKPGDLLVA | HHHH--TT-EEEE | aaaabbpgxbbbb |
1d2f_A_96 | 1d2f | A | 104 | 116 | IRQWSETGEGVVI | HHHSS-TT-EEEE | aaaabbpgxbbxb |
1dfo_A_98 | 1dfo | A | 106 | 118 | YTALLEPGDTVLG | HHHH--TT-EEEE | aaaabbpvxxbbb |
1dxy_*_217 | 1dxy | - | 219 | 231 | AFNLMKPGAIVIN | HHHHS-TTEEEEE | aaaapxxvxbbbb |
1e0t_A_113 | 1e0t | A | 113 | 125 | FTTDLSVGNTVLV | HHHH--TT-EEEE | aaaaxbpgpbbbx |
1g60_A_199 | 1g60 | A | 206 | 218 | IRASSNPNDLVLD | HHHH--TT-EEEE | aaaabbpvxbbbb |
1gc0_A_89 | 1gc0 | A | 97 | 109 | LWTLLRPGDEVLL | HHHH--TT-EEEE | aaaabbpgxbbxb |
1gu7_A_277 | 1gu7 | A | 283 | 295 | IARKLNNNGLMLT | HHHTS-TT-EEEE | aaaaxxpvxbbbx |
1iay_A_126 | 1iay | A | 135 | 147 | IFCLADPGDAFLV | HHHH--TT-EEEE | aaaabxpgxbbxb |
1isp_A_138 | 1isp | A | 138 | 150 | NYLSRLDGARNVQ | HHHH--BTSEEEE | aaaaxbxgxxxbx |
1j4a_A_219 | 1j4a | A | 221 | 233 | SIAKMKQDVVIVN | HHHHS-TTEEEEE | aaaaxxpvxbbbb |
1jf9_A_94 | 1jf9 | A | 106 | 118 | GNSNVRAGDNIII | HHHH--TT-EEEE | aaaabbpvxbbbb |
1jgt_A_219 | 1jgt | A | 234 | 246 | VAQRVTPGDTPLV | HHHHS-TT---EE | aaaabxpgxxxbb |
1liu_A_207 | 1liu | A | 207 | 219 | IVRVVPVGGRIYI | HHHHS-TT-EEEE | aaaaxxpvxbbxb |
1m7y_A_119 | 1m7y | A | 128 | 140 | IFCLADPGEAVLI | HHHH--TT-EEEE | aaaabxpvxbbxb |
1n8p_A_79 | 1n8p | A | 86 | 98 | ILQSLPQGSHAVS | HHHTS-SS-EEEE | aaaaxxpvbbbbb |
1o4s_A_97 | 1o4s | A | 106 | 118 | FMALLDPGDEVIV | HHHH--TT-EEEE | aaaaxxpvxbbxb |
1pkl_A_131 | 1pkl | A | 131 | 143 | LSKVVRPGNYIYI | HHHH--TT-EEEE | aaaaxbxgxbbxb |
1poi_A_7 | 1poi | A | 11 | 23 | IAKYVHSGDHIAL | HHHH--TT-EEEE | aaaabbxgpxbbb |
1psd_A_223 | 1psd | A | 225 | 237 | EISLMKPGSLLIN | HHHHS-TTEEEEE | aaaaxpxvxbbbb |
1qmg_A_202 | 1qmg | A | 212 | 224 | VFSHMKPNSILGL | HHHHS-TT-EEEE | aaaaxxxvxbxbb |
1rfs_*_65 | 1rfs | - | 68 | 80 | WLKTHAPGDRTLT | HHHHS-TT-EEEE | aaaabxpvxbbxb |
1ufk_A_105 | 1ufk | A | 114 | 126 | LARHLRPGDKVLD | HHHH--TT-EEEE | aaaaxbpvxxbbb |
1zym_A_208 | 1zym | A | 208 | 220 | VTSQVKNDDYLIL | HHHH--TT-EEEE | aaaabbpvxxbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gu7_A_277 | 1gu7 | A | BC3SO4 BINDING SITE FOR CHAIN A | R - 285 |
1gu7_A_277 | 1gu7 | A | AC6GOL BINDING SITE FOR CHAIN A | L - 287 |
1gu7_A_277 | 1gu7 | A | AC6GOL BINDING SITE FOR CHAIN A | N - 288 |
1gu7_A_277 | 1gu7 | A | AC6GOL BINDING SITE FOR CHAIN A | N - 289 |
Clusters included in this Subclass |
CLUSTER: HE.4.25 |
CLUSTER: HE.4.308 |
CLUSTER: HE.5.10 |
CLUSTER: HE.6.4 |