Information on SUBCLASS 3.11.1 |
Subclass Accession number: 6203
Subclass: 3.11.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 19 Average sequence ID (%) : 20.9 +/- 22.4 Average RMSD (Å) : 0.858 +/- 0.096 Consensus geometry
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Consensus Sequence: | XXpXGXX |
(φψ)-conformation: | bbplebb |
Pattern: | [agikltv] | x | [eknqsty] | x | [GY] | x | x |
Conservation: | -0.392 | -0.455 | -0.244 | -0.352 | 2.258 | -0.519 | -0.295 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bj7_*_77 | 1bj7 | - | 80 | 86 | LEFYGTN | EESSSEE | bxblexb |
1cb8_A_497 | 1cb8 | A | 498 | 504 | ISTAGKT | EETTEEE | bbxvebx |
1df9_A_117 | 1df9 | A | 117 | 123 | KTNAGTI | EESSSEE | bxbvexb |
1dzk_A_77 | 1dzk | A | 80 | 86 | VNYAGNN | EESSSEE | bxblebb |
1e5p_A_72 | 1e5p | A | 74 | 80 | TQFEGNN | EESSSEE | bxblexb |
1ew3_A_98 | 1ew3 | A | 101 | 107 | LNYDGYN | EESSSEE | bxblebb |
1gm6_A_82 | 1gm6 | A | 85 | 91 | VAYYGEN | EESSSEE | bxblexb |
1gt1_A_79 | 1gt1 | A | 81 | 87 | ADYEGQN | EESSSEE | bbblebb |
1i8a_A_116 | 1i8a | A | 122 | 128 | LIEGGYI | EETTEEE | xbxvebb |
1j3q_A_171 | 1j3q | A | 174 | 180 | VEENGKV | EESSSEE | bbbvexb |
1j58_A_58 | 1j58 | A | 59 | 65 | LEKGGYA | EETTEEE | xbxgebb |
1l0w_A_350 | 1l0w | A | 354 | 360 | VEEGGFS | EETTEEE | bbxvebb |
1m56_B_134 | 1m56 | B | 140 | 146 | GYQWYWG | EETTEEE | xbpvebb |
1n1t_A_450 | 1n1t | A | 452 | 458 | RVPNGLK | EETTEEE | xbpvebb |
1nw1_A_141 | 1nw1 | A | 144 | 150 | IFSGGRL | EETTEEE | bbxvebb |
1plq_*_235 | 1plq | - | 240 | 246 | DLKSGFL | EETTEEE | xbxvebb |
1qy1_A_80 | 1qy1 | A | 82 | 88 | VTYDGFN | EESSSEE | bxblebb |
1v54_B_95 | 1v54 | B | 101 | 107 | GHQWYWS | EETTEEE | xbxvebb |
2a2u_A_80 | 2a2u | A | 82 | 88 | VEYDGGN | EESSSEE | bxblexb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gm6_A_82 | 1gm6 | A | CAVODOUR-BINDING CAVITY | V - 85 |
1gm6_A_82 | 1gm6 | A | CAVODOUR-BINDING CAVITY | F - 93 |
1gt1_A_79 | 1gt1 | A | ANAANC BINDING SITE FOR CHAIN A | Y - 83 |
1gt1_A_79 | 1gt1 | A | PRZPRZ BINDING SITE FOR CHAIN A | F - 89 |
Clusters included in this Subclass |
CLUSTER: HA.1.33 |
CLUSTER: HA.2.28 |