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Information on SUBCLASS 4.27.1
Subclass Accession number: 1315
Subclass: 4.27.1 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.5 (>75 %)  2.5.1 (>75 %)  2.5.1.18 (>75 %)  
GO : GO:0004364 (>75 %)  GO:0005351 (>75 %)  GO:0005386 (>75 %)  GO:0015144 (>75 %)  GO:0015290 (>75 %)  GO:0015291 (>75 %)  GO:0016765 (>75 %)  GO:0051119 (>75 %)  
SCOP : 52832 (>75 %)  52833 (>75 %)  52862 (>75 %)  53821 (>75 %)  53822 (>75 %)  53823 (>75 %)  
Number of loops: 12

Average sequence ID (%) : 13.6 +/- 14.1
Average RMSD (Å) : 0.800 +/- 0.263

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: XXXGXpXp
(φψ)-conformation: bbpgbpaa
Pattern: xxxxx[AGY]x[dnsty]x[ehrsw]x[ACLTV]xx
Conservation:-0.733-0.729-0.475-0.141-0.5213.113-0.6740.417-0.3630.167-0.1350.804-0.339-0.392
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ayf_A_181ayf   A2134TKGKIGDSLLDVVVEEE-TT-BHHHHHHbbbxpgxxaaaaaa
1c1y_B_661c1y   B7083VNVRNGMSLHDCLMEE--TT-BHHHHHHbxbbpgxxaGaaaa
1e1o_A_2731e1o   A278291ELYMAYADYHDLIEEEEEES--HHHHHHbbbbxvbbaaaaaa
1efu_B_1511efu   B154167LVAAKGADEELVKHEEEEES--HHHHHHbbbbbvbxaaaaaa
1f0x_A_4941f0x   A499512YIVKKGVDVHALKEEEEETT--HHHHHHbbxppvxxaaaaaa
1g0s_A_951g0s   A97110GMIEEGESVEDVAREE--TT--HHHHHHbxxbpvbxaaaaaa
1krh_A_151krh   A1831ICIAQGETLSDAAYEEE-TT--HHHHHHbbbxxgxxaaaaaa
1ng2_A_2801ng2   A280292.LQKSGQDVSQAQR.EEETTS-HHHHHH.bbppvbxaaaaaa
1nx4_A_2021nx4   A203216EPRIVGFTDHETQAEEEETT--HHHHHHbwbbxvbxaaaaaa
1r3e_A_1671r3e   A172185VEVSPGTYIRSLCMEEE-TT--HHHHHHbbbxpvxbaaaaaa
1szw_A_431szw   A4760RILKNGCNTRFVADEEEESSS-HHHHHHxbxbbgbxaaaaaa
1v8c_A_871v8c   A90103ERTFGAFPPWLLEREEEEET--HHHHHHbbbbxlbxaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ayf_A_181ayf   A     FESFE2/S2 (INORGANIC) CLUSTER L - 30
1e1o_A_2731e1o   A     GOLGLYCEROL F - 274
1e1o_A_2731e1o   A     GOLGLYCEROL T - 275
1e1o_A_2731e1o   A     LYSLYSINE M - 276
1e1o_A_2731e1o   A     GOLGLYCEROL M - 276
1e1o_A_2731e1o   A     LYSLYSINE E - 278
1e1o_A_2731e1o   A     LYSLYSINE L - 279
1e1o_A_2731e1o   A     LYSLYSINE Y - 280
1e1o_A_2731e1o   A     GOLGLYCEROL Y - 286
1e1o_A_2731e1o   A     GOLGLYCEROL H - 287
1f0x_A_4941f0x   A     FADFLAVIN-ADENINE DINUCLEOTIDE H - 496
1nx4_A_2021nx4   A     MSESELENOMETHIONINE L - 221
1nx4_A_2021nx4   A     MSESELENOMETHIONINE F - 224
1nx4_A_2021nx4   A     MSESELENOMETHIONINE L - 225
1r3e_A_1671r3e   A     FHU(5S,6R)-5-FLUORO-6-HYDROXY-PSEUDOURIDINE-5'-MONOPHOSPHATE P - 176
1r3e_A_1671r3e   A     FHU(5S,6R)-5-FLUORO-6-HYDROXY-PSEUDOURIDINE-5'-MONOPHOSPHATE G - 177
1r3e_A_1671r3e   A     FHU(5S,6R)-5-FLUORO-6-HYDROXY-PSEUDOURIDINE-5'-MONOPHOSPHATE T - 178
1r3e_A_1671r3e   A     FHU(5S,6R)-5-FLUORO-6-HYDROXY-PSEUDOURIDINE-5'-MONOPHOSPHATE Y - 179
1r3e_A_1671r3e   A     FHU(5S,6R)-5-FLUORO-6-HYDROXY-PSEUDOURIDINE-5'-MONOPHOSPHATE I - 180
1r3e_A_1671r3e   A     FHU(5S,6R)-5-FLUORO-6-HYDROXY-PSEUDOURIDINE-5'-MONOPHOSPHATE R - 181
1r3e_A_1671r3e   A     FHU(5S,6R)-5-FLUORO-6-HYDROXY-PSEUDOURIDINE-5'-MONOPHOSPHATE S - 182
1szw_A_431szw   A     MSESELENOMETHIONINE I - 44

Clusters included in this Subclass
CLUSTER: EH.4.54
CLUSTER: EH.5.129