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Information on SUBCLASS 3.3.3
Subclass Accession number: 2303
Subclass: 3.3.3 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : - (>75 %)  
 Number of loops: 16

Average sequence ID (%) : 15.8 +/- 15.4
Average RMSD (Å) : 0.756 +/- 0.266

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 90-135 rho (°): 180-225
Consensus Sequence: hhGhXXp
(φψ)-conformation: aagppaa
Pattern: x[agrst][aiklv][fgiltv][acflmvy][adegkrst][ailmvy][acilmv][GKQ][filv][dgps][aekqrs][ADENST]xx[dehnprt]xx
Conservation:-0.670-0.472-0.162-0.207-0.175-0.522-0.3720.7973.1861.0650.457-0.1950.917-0.755-1.018-0.508-0.765-0.601
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cpt_*_1611cpt   -163180LHVVMTALGVPEDDEPLMHHHHHHHHT--GGGHHHHaaaaaaaagxwaaaaaaa
1d1l_A_161d1l   A1633QTKTAKDLGVYQSAINKAHHHHHHHHT--THHHHHHaaaaaaaavbxaaaaaaa
1dz4_A_1571dz4   A160177IRIFMLLAGLPEEDIPHLHHHHHHHHT--GGGHHHHaaaaaaaavbxaaaaaaa
1fp2_A_541fp2   A5471LSNLVSILQVPSSKIGNVHHHHHHHHT--GGGHHHHaaaaaaaalxxaaaaaaa
1g3s_A_661g3s   A83100ERLLTDIIGLDINKVHDEHHHHHHTT---TTTHHHHaaaaaaaavxpaaaaaaa
1hwl_A_7531hwl   A757774VTAIYIACGQDAAQNVGSHHHHHHHTT--GGGHHHHaaaaaaaavxxaaaaaaa
1iiz_A_51iiz   A825LVNELRKQGFDENLMRDWHHHHHHHTT--GGGHHHHaaaaaaaavxpaaaaaaa
1io7_A_1241io7   A127144IIVISKILGLPIEDKEKFHHHHHHHHT--GGGHHHHaaaaaaaavbpaaaaaaa
1iom_A_3111iom   A315332SGVVYSDLGFSLEFFTPIHHHHHHHTT--GGGHHHHaaaaaaaagxxaaaaaaa
1k3p_A_3611k3p   A365382SGIILKAMGIPSSMFTVIHHHHHHHTT--GGGHHHHaaaaaaaavxxaaaaaaa
1l0w_A_4871l0w   A490507QARVFRLLGIGEEEQREKHHHHHHHHT--TTTHHHHaaaaaaaavxpaaaaaaa
1lfk_A_1471lfk   A149166GAVLCELVGVPRDDRDMFHHHHHHHHT--GGGHHHHaaaaaaaagxpaaaaaaa
1n40_A_1381n40   A143160TALHCKVLGIPQEDGPKLHHHHHHHHT--GGGHHHHaaaaaaaavbxaaaaaaa
1nvm_A_2801nvm   A281298ETLGLGYAGVYSSFLRHAHHHHHHHHT--TTHHHHHaaaaaaaavbpaaaaaaa
1q5d_A_1541q5d   A155172MRAISALLKVPAECDEKFHHHHHHHTT--GGGHHHHaaaaaaaalbwaaaaaaa
2scp_A_1132scp   A116133YGIFFGMLGLDKTMAPASHHHHHHHTT--GGGHHHHaaaaaaaavxxaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cpt_*_1611cpt   *     HEMPROTOPORPHYRIN IX CONTAINING FE V - 166
1dz4_A_1571dz4   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 163
1dz4_A_1571dz4   A     CAMCAMPHOR T - 185
1hwl_A_7531hwl   A     FBI7-[4-(4-FLUORO-PHENYL)-6-ISOPROPYL-2-(METHANESULFONYL-METHYL-AMINO)-PYRIMIDIN-5-YL] -3,5-DIHYDROXY-HEPTANOIC ACID N - 755
1hwl_A_7531hwl   A     FBI7-[4-(4-FLUORO-PHENYL)-6-ISOPROPYL-2-(METHANESULFONYL-METHYL-AMINO)-PYRIMIDIN-5-YL] -3,5-DIHYDROXY-HEPTANOIC ACID D - 767
1io7_A_1241io7   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 130
1iom_A_3111iom   A     GOLGLYCEROL V - 311
1iom_A_3111iom   A     GOLGLYCEROL D - 312
1iom_A_3111iom   A     GOLGLYCEROL S - 315
1iom_A_3111iom   A     CO3CARBONATE ION F - 333
1iom_A_3111iom   A     GOLGLYCEROL F - 333
1iom_A_3111iom   A     CO3CARBONATE ION R - 337
1iom_A_3111iom   A     GOLGLYCEROL R - 337
1iom_A_3111iom   A     GOLGLYCEROL G - 343
1iom_A_3111iom   A     GOLGLYCEROL L - 346
1iom_A_3111iom   A     GOLGLYCEROL E - 347
1iom_A_3111iom   A     GOLGLYCEROL Y - 348
1iom_A_3111iom   A     GOLGLYCEROL E - 350
1k3p_A_3611k3p   A     SULSULFATE ANION V - 361
1k3p_A_3611k3p   A     SULSULFATE ANION D - 362
1k3p_A_3611k3p   A     SULSULFATE ANION R - 387
1lfk_A_1471lfk   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 152
1lfk_A_1471lfk   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 155
1n40_A_1381n40   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 145
1n40_A_1381n40   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 146
1n40_A_1381n40   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 149
1nvm_A_2801nvm   A     SULSULFATE ANION G - 284
1nvm_A_2801nvm   A     SULSULFATE ANION Y - 287
1nvm_A_2801nvm   A     MNMANGANESE (II) ION Y - 291
1nvm_A_2801nvm   A     OXLOXALATE ION Y - 291
1q5d_A_1541q5d   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 158
1q5d_A_1541q5d   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 161
1q5d_A_1541q5d   A     EPB7,11-DIHYDROXY-8,8,10,12,16-PENTAMETHYL-3-[1-METHYL-2-(2-METHYL-THIAZOL-4-YL)VINYL]-4,17-DIOXABICYCLO[14.1.0]HEPTADECANE-5,9-DIONE T - 179
1q5d_A_1541q5d   A     EPB7,11-DIHYDROXY-8,8,10,12,16-PENTAMETHYL-3-[1-METHYL-2-(2-METHYL-THIAZOL-4-YL)VINYL]-4,17-DIOXABICYCLO[14.1.0]HEPTADECANE-5,9-DIONE A - 180
1q5d_A_1541q5d   A     EPB7,11-DIHYDROXY-8,8,10,12,16-PENTAMETHYL-3-[1-METHYL-2-(2-METHYL-THIAZOL-4-YL)VINYL]-4,17-DIOXABICYCLO[14.1.0]HEPTADECANE-5,9-DIONE R - 181
2scp_A_1132scp   A     CACALCIUM ION E - 115
2scp_A_1132scp   A     CACALCIUM ION I - 137

Clusters included in this Subclass
CLUSTER: HH.5.218
CLUSTER: HH.5.41
CLUSTER: HH.6.20
CLUSTER: HH.6.34
CLUSTER: HH.7.40
CLUSTER: HH.7.8
CLUSTER: HH.8.40