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Information on SUBCLASS 3.4.1
Subclass Accession number: 2916
Subclass: 3.4.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 28

Average sequence ID (%) : 10.2 +/- 15.2
Average RMSD (Å) : 0.711 +/- 0.250

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 90-135 rho (°): 45-90
Consensus Sequence: XXXXXXX
(φψ)-conformation: bbappaa
Pattern: [cfgiklmtv]x[adstv]xx[adegnpst]x[adegkrst][adekqt]x
Conservation:0.292-0.8121.852-0.194-1.2981.052-0.931-0.8230.6300.232
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a77_*_1461a77   -147156VEAPSEGEAQEE-SS-HHHHbbxaFxaaaa
1b43_A_1451b43   A146155VQAPSEGEAQEE-SS-HHHHbxxabpaaaa
1cc8_A_441cc8   A4756VYTTLPYDFIEEESS-HHHHbbbaxxaaaa
1cer_O_271cer   O3039INDLTDNKTLEE-SS-HHHHbbbabxaaaa
1cmi_A_71cmi   A918KNADMSEEMQEEE-S-HHHHabbaxxaaaa
1em2_A_2801em2   A287296TFLPCPAELVEEESS-HHHHbxbabxaaaa
1har_*_1861har   -189198VGSDLAIGAHEEESS-HHHHbbbaxxaaaa
1i4j_A_31i4j   A817RYVRISPRKVEEESS-HHHHblxabpaaaa
1i8t_A_2241i8t   A227236IIYTGPIDQYEEE-S-HHHHbbbaxxaaaa
1iq8_A_5531iq8   A557566GQALLSGREMEEESS-HHHHbbxabxaaaa
1j9j_A_621j9j   A6574YSTTGTPADCEEESS-HHHHbbbaxxaaaa
1k0g_A_711k0g   A7382TTTTDDPLQVEEE-S-HHHHbbbaxpaaaa
1kcm_A_31kcm   A918VILPVSVDEYEEESS-HHHHbxbabxaaaa
1l5x_A_621l5x   A6473IATSGTPSDTEEESS-HHHHbxbaxxaaaa
1mu2_A_1861mu2   A189198IASDRTDLEHEEE-S-HHHHbbbaxxaaaa
1ni9_A_1801ni9   A182191FAIPDGDVAAEEES--HHHHbxbaxxaaaa
1nrw_A_1091nrw   A109118IYTPQNGRELEEE---HHHHbxbaxxaaaa
1o6b_A_651o6b   A6877ETSQGLLIDYEE-SS-HHHHbbbaxxaaaa
1q98_A_761q98   A8089CISADLPFAQEEESS-HHHHxbbaxxaaaa
1qgi_A_1131qgi   A114123LEIKDSEKVFEEE-S-HHHHbbxaxxaaaa
1qmv_A_701qmv   A7483GVSVDSQFTHEEESS-HHHHbbbaxxaaaa
1qq5_A_1091qq5   A112121ILSNGAPDMLEEESS-HHHHbbbapxaaaa
1qup_A_481qup   A4857VESSVAPSTIEEESS-HHHHbbbaxpaaaa
1qyi_A_2331qyi   A236245IATGRPYTETEE-SS-HHHHbbbaxxaaaa
1rxw_A_1451rxw   A146155VDAPSEGEAQEE-SS-HHHHbxxaFpaaaa
1su4_A_6201su4   A623632MITGDNKGTAEEESS-HHHHxbbaxxaaaa
1vjh_A_41vjh   A1120FDVKCPADKFEEESS-HHHHbbbaxxaaaa
1vrt_A_1861vrt   A189198VGSDLEIGQHEEE-S-HHHHbbbaxxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a77_*_1461a77   *     MGMAGNESIUM ION E - 152
1a77_*_1461a77   *     MGMAGNESIUM ION G - 153
1a77_*_1461a77   *     MGMAGNESIUM ION E - 154
1cer_O_271cer   O     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE N - 31
1cer_O_271cer   O     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE D - 32
1cer_O_271cer   O     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE L - 33
1cer_O_271cer   O     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE T - 34
1em2_A_2801em2   A     MSESELENOMETHIONINE F - 283
1em2_A_2801em2   A     MSESELENOMETHIONINE I - 284
1em2_A_2801em2   A     MSESELENOMETHIONINE L - 285
1em2_A_2801em2   A     MSESELENOMETHIONINE E - 299
1i8t_A_2241i8t   A     FADFLAVIN-ADENINE DINUCLEOTIDE Y - 229
1i8t_A_2241i8t   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 230
1i8t_A_2241i8t   A     FADFLAVIN-ADENINE DINUCLEOTIDE G - 231
1i8t_A_2241i8t   A     FADFLAVIN-ADENINE DINUCLEOTIDE P - 232
1i8t_A_2241i8t   A     FADFLAVIN-ADENINE DINUCLEOTIDE Q - 235
1iq8_A_5531iq8   A     MGMAGNESIUM ION E - 565
1iq8_A_5531iq8   A     MGMAGNESIUM ION M - 566
1iq8_A_5531iq8   A     MGMAGNESIUM ION I - 567
1iq8_A_5531iq8   A     MGMAGNESIUM ION V - 568
1l5x_A_621l5x   A     GOLGLYCEROL R - 62
1l5x_A_621l5x   A     GOLGLYCEROL A - 63
1l5x_A_621l5x   A     MSESELENOMETHIONINE I - 64
1l5x_A_621l5x   A     GOLGLYCEROL I - 64
1l5x_A_621l5x   A     MSESELENOMETHIONINE A - 65
1l5x_A_621l5x   A     MSESELENOMETHIONINE T - 66
1l5x_A_621l5x   A     MSESELENOMETHIONINE S - 67
1l5x_A_621l5x   A     MSESELENOMETHIONINE L - 76
1l5x_A_621l5x   A     GOLGLYCEROL L - 76
1l5x_A_621l5x   A     MSESELENOMETHIONINE A - 77
1l5x_A_621l5x   A     GOLGLYCEROL A - 77
1l5x_A_621l5x   A     GOLGLYCEROL T - 78
1l5x_A_621l5x   A     MSESELENOMETHIONINE F - 79
1l5x_A_621l5x   A     MSESELENOMETHIONINE G - 80
1l5x_A_621l5x   A     GOLGLYCEROL G - 80
1l5x_A_621l5x   A     GOLGLYCEROL L - 81
1nrw_A_1091nrw   A     PO4PHOSPHATE ION R - 125
1nrw_A_1091nrw   A     CACALCIUM ION A - 129
1qmv_A_701qmv   A     CSD3-SULFINOALANINE W - 86
1qq5_A_1091qq5   A     FMTFORMIC ACID I - 112
1qq5_A_1091qq5   A     FMTFORMIC ACID L - 113
1qq5_A_1091qq5   A     FMTFORMIC ACID S - 114
1qq5_A_1091qq5   A     FMTFORMIC ACID N - 115
1qq5_A_1091qq5   A     FMTFORMIC ACID G - 116
1qq5_A_1091qq5   A     FMTFORMIC ACID L - 121
1qup_A_481qup   A     MSESELENOMETHIONINE V - 48
1qup_A_481qup   A     MSESELENOMETHIONINE I - 57
1qup_A_481qup   A     MSESELENOMETHIONINE L - 61
1qyi_A_2331qyi   A     MSESELENOMETHIONINE E - 233
1vjh_A_41vjh   A     MSESELENOMETHIONINE F - 21
1vjh_A_41vjh   A     MSESELENOMETHIONINE F - 24
1vjh_A_41vjh   A     MSESELENOMETHIONINE V - 25
1vrt_A_1861vrt   A     NEVNEVIRAPINE Y - 188
1vrt_A_1861vrt   A     NEVNEVIRAPINE V - 189
1vrt_A_1861vrt   A     NEVNEVIRAPINE G - 190
1vrt_A_1861vrt   A     NEVNEVIRAPINE S - 191

Clusters included in this Subclass
CLUSTER: EH.2.91
CLUSTER: EH.3.101
CLUSTER: EH.3.72
CLUSTER: EH.4.187
CLUSTER: EH.4.193
CLUSTER: EH.4.30
CLUSTER: EH.5.126