Information on SUBCLASS 1.2.7 |
Subclass Accession number: 3659
Subclass: 1.2.7 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 23 Average sequence ID (%) : 10.3 +/- 15.1 Average RMSD (Å) : 0.574 +/- 0.198 Consensus geometry
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Consensus Sequence: | XXppX |
(φψ)-conformation: | bbabb |
Pattern: | x | [altv] | [deknrsy] | [adegnrst] | x | x | x |
Conservation: | -1.019 | 1.497 | -0.250 | 0.928 | -0.766 | -0.948 | 0.558 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aoz_A_244 | 1aoz | A | 250 | 256 | YTSDIDI | EES-EEE | xbabbxb |
1aqt_*_75 | 1aqt | - | 79 | 85 | LADTAIR | EESSEEE | xxabbbx |
1cbg_*_350 | 1cbg | - | 352 | 356 | ATFEH.. | EESEE.. | bbabb.. |
1g0u_2_120 | 1g0u | 2 | 121 | 127 | KLPYAIA | EESEEEE | xbabbbb |
1g0u_D_157 | 1g0u | D | 159 | 165 | RYNAKAI | EESEEEE | bbabbbb |
1g0u_E_156 | 1g0u | E | 159 | 165 | ELYGTAI | EESEEEE | xbabebb |
1gtr_A_344 | 1gtr | A | 344 | 350 | AVIDPVK | EESSEEE | bbabxbx |
1gw0_A_255 | 1gw0 | A | 261 | 267 | TVDSLFL | EES-EEE | xbabbxb |
1gw0_A_475 | 1gw0 | A | 475 | 481 | RRDTTML | EESEEEE | bbabbxx |
1gyc_A_226 | 1gyc | A | 232 | 238 | LVDSIQI | EESBEEE | xbabbxb |
1hfu_A_225 | 1hfu | A | 231 | 237 | TVDRLQI | EESBEEE | bbabbbb |
1i5z_A_85 | 1i5z | A | 87 | 93 | RAKTACE | EESS-EE | bxabxbb |
1io1_A_276 | 1io1 | A | 277 | 283 | DVKNVQV | EESEEEE | bbabxxb |
1jj2_K_119 | 1jj2 | K | 121 | 125 | IADDF.. | EESEE.. | bbabb.. |
1kid_*_247 | 1kid | - | 250 | 254 | IAEDV.. | EESEE.. | bbabb.. |
1kk1_A_280 | 1kk1 | A | 281 | 285 | FVEEA.. | EESEE.. | xbabb.. |
1kv7_A_262 | 1kv7 | A | 269 | 275 | KVSELPV | EES-EEE | xbabbpb |
1n7v_A_141 | 1n7v | A | 142 | 148 | NTAYKAE | EESEEEE | xbabbxa |
1nbf_A_340 | 1nbf | A | 346 | 352 | DYYDIQL | EESSEEE | xbabbxb |
1ne6_A_212 | 1ne6 | A | 214 | 220 | KAKTNVK | EESS-EE | bxabxbb |
1o7f_A_126 | 1o7f | A | 128 | 134 | VTRESSE | EESSSEE | bxabpbb |
1q3e_A_594 | 1q3e | A | 596 | 602 | RADTYCR | EESS-EE | bxaxxbb |
1q3q_A_233 | 1q3q | A | 233 | 239 | RVENAKI | EESSEEE | bbaxpbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gw0_A_255 | 1gw0 | A | MANALPHA-D-MANNOSE | V - 262 |
1gw0_A_255 | 1gw0 | A | O2OXYGEN MOLECULE | D - 263 |
1gw0_A_255 | 1gw0 | A | MANALPHA-D-MANNOSE | D - 263 |
1gw0_A_255 | 1gw0 | A | MANALPHA-D-MANNOSE | S - 264 |
1gyc_A_226 | 1gyc | A | NAGN-ACETYL-D-GLUCOSAMINE | L - 232 |
1gyc_A_226 | 1gyc | A | NAGN-ACETYL-D-GLUCOSAMINE | D - 234 |
1i5z_A_85 | 1i5z | A | CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE | W - 85 |
1i5z_A_85 | 1i5z | A | CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE | V - 86 |
1ne6_A_212 | 1ne6 | A | SP16-(6-AMINO-PURIN-9-YL)-2-THIOXO-TETRAHYDRO-2-FURO[3,2-D][1,3,2]DIOXAPHOSPHININE-2,7-DIOL | T - 212 |
1ne6_A_212 | 1ne6 | A | SP16-(6-AMINO-PURIN-9-YL)-2-THIOXO-TETRAHYDRO-2-FURO[3,2-D][1,3,2]DIOXAPHOSPHININE-2,7-DIOL | V - 213 |
1q3e_A_594 | 1q3e | A | PCGCYCLIC GUANOSINE MONOPHOSPHATE | S - 594 |
1q3e_A_594 | 1q3e | A | PCGCYCLIC GUANOSINE MONOPHOSPHATE | V - 595 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gw0_A_255 | 1gw0 | A | GC4MAN BINDING SITE FOR CHAIN B | D - 263 |
Clusters included in this Subclass |
CLUSTER: AR.1.18 |
CLUSTER: AR.2.29 |
CLUSTER: AR.3.84 |