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Information on SUBCLASS 5.8.1
Subclass Accession number: 4005
Subclass: 5.8.1 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 17

Average sequence ID (%) : 25.3 +/- 23.4
Average RMSD (Å) : 0.376 +/- 0.125

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: hXXpppGXh
(φψ)-conformation: bbppaagbb
Pattern: xx[IMTV][ADGNS][ADEGRST][DEKNS][G][deknqswy][AFGILVY]x
Conservation:-0.813-0.6210.2970.294-0.2070.2932.558-0.649-0.471-0.682
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bco_*_4951bco   -495504VNVSRKGEFTEE--TTSEEEbxbxaavbbb
1cwv_A_5531cwv   A556565EKTDANGVAREE--TTSEEEbbxxaavbbb
1dmh_A_1791dmh   A182191IITDENGQYREE--TTSEEEbxxxaavbbb
1e43_A_4601e43   A460469VVINSEGWGEEE--TTSEEEbxxxaavbbb
1eo9_B_4261eo9   B429438MLTDDNGYYVEE--TTSEEEbbxxaavxbb
1f00_I_7091f00   I710719EKTDTNGYAKEE--TTSEEEbbxxaavxbb
1f86_A_411f86   A4755GKTSESGEL.EE--TTSEE.bbxxaavbb.
1hvx_A_4591hvx   A460469VTINSDGWGEEE--TTSEEEbbxxaavbbb
1kgi_A_411kgi   A4755GKTAESGEL.EE--TTSEE.ebxxaavbb.
1mp2_A_451mp2   A4958VAMDDNGNIPEE--TTSEEEbxxxaavbbx
1mxg_A_4011mxg   A402411KRVDSSGWVYEE--TTSEEEbbxxaagxbx
1nof_A_3851nof   A390399SQVDSSGKATEE--TTSEEEbxxxaavbbb
1qex_A_1761qex   A179188WNISTSGSVDEE--TTSEEEbxxpaavbbb
1ud2_A_4561ud2   A457466VTINGDGWGEEE--TTSEEEbxxxaavbbb
2aaa_*_4412aaa   -443452VTVDSSGDIPEE--TTS-EEbbxpaavxbw
3pcc_M_4263pcc   M429438CLTDSDGYYSEE--TTSEEEbxxxaavxbb
7taa_*_4417taa   -443452VTVGSDGNVPEE--TTS-EEbbxxaavxbw
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1f86_A_411f86   A     T443,5,3',5'-TETRAIODO-L-THYRONINE E - 54
1kgi_A_411kgi   A     T4A3,3',5,5'-TETRAIODOTHYROACETIC ACID E - 54
1mxg_A_4011mxg   A     EOHETHANOL D - 401

Clusters included in this Subclass
CLUSTER: AR.4.38
CLUSTER: AR.5.23