Information on SUBCLASS 5.10.1 |
Subclass Accession number: 4898
Subclass: 5.10.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 12 Average sequence ID (%) : 21.3 +/- 22.4 Average RMSD (Å) : 0.792 +/- 0.198 Consensus geometry
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Consensus Sequence: | XXGXphXhp |
(φψ)-conformation: | aagbbppaa |
Pattern: | x | [aglpvw] | x | [aikmt] | [G] | x | [dknrwy] | [ALPTV] | [dpst] | [ailmpv] | [DEGPS] | [egqst] | [ailv] | x |
Conservation: | -0.425 | -0.672 | -0.410 | -0.152 | 3.324 | -0.588 | -0.434 | 0.035 | -0.013 | -0.361 | 0.320 | -0.045 | 0.020 | -0.598 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dxr_M_241 | 1dxr | M | 251 | 264 | RWTIGFNATIESVH | HHHHS----HHHHH | aaaavbbxbaaaaa |
1eys_M_242 | 1eys | M | 252 | 265 | RWTMGFNATMESIH | HHHHS----TTHHH | aaaavbbbbaaaaa |
1ezv_A_382 | 1ezv | A | 393 | 406 | VLIKGSKLSLGEAF | HHHHSS---HHHHH | aaaavbbxxaaaaa |
1hl2_A_140 | 1hl2 | A | 140 | 153 | PARSGVKLTLDQIN | HHHH-----HHHHH | aaaavxxxxaaaaa |
1hr6_B_391 | 1hr6 | B | 402 | 415 | VVTTGKRLSPEEVF | HHHHSS---HHHHH | aaaavbbxxaaaaa |
1l0l_B_375 | 1l0l | B | 386 | 399 | ALAAGSYTPPSTVL | HHHHSS---HHHHH | aaaavbbbxaaaaa |
1nqk_A_113 | 1nqk | A | 116 | 129 | LAGDGVFLDHSERY | HHHHT----TTHHH | aaaagbbbxaaaaa |
1o5k_A_135 | 1o5k | A | 135 | 148 | PGRTGVNVLPETAA | HHHHS----HHHHH | aaaavbbxxaaaaa |
1on3_A_206 | 1on3 | A | 210 | 223 | KSVTGEDVTADELG | HHHH-----HHHHH | aaaavxbbxaaaaa |
1rhc_A_109 | 1rhc | A | 113 | 126 | VPVTGEWPSVPVRQ | HHHH-----HHHHH | aaaavbbwxaaaaa |
1rzh_M_243 | 1rzh | M | 253 | 266 | RWTMGFNATMEGIH | HHHHS----TTHHH | aaaavbbbbaaaaa |
1s5t_A_136 | 1s5t | A | 136 | 149 | PSRTGCDLLPETVG | HHHHS----HHHHH | aaaavbbxxaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HH.4.86 |
CLUSTER: HH.6.24 |