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Information on SUBCLASS 1.3.1
Subclass Accession number: 5295
Subclass: 1.3.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 15

Average sequence ID (%) : 9.2 +/- 13.8
Average RMSD (Å) : 0.480 +/- 0.231

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 0-45 rho (°): 90-135
Consensus Sequence:
(φψ)-conformation:
Pattern: x[dehqrw]xx[agknrst][aeknqrt]xxx
Conservation:-0.8440.978-1.493-0.6590.6961.1640.8150.361-1.016
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dkf_B_2541dkf   B271278LRICTRYT.HHHHTTEE.aaaaaaxb.
1g9g_A_4321g9g   A443451KWINGEIKFHHHHTS-EEaaaaaaxbb
1h54_A_221h54   A2432LQESMTSLGHHHHHT-EEaaaaaaxbb
1i6i_A_3381i6i   A348356ADRAKQIRNHHHHTT-EEaaaaaaxbx
1k75_A_2961k75   A299307RQALNASRLHHHHTT-EEaaaaaaxbb
1k8k_B_2941k8k   B295303SEFYKHIVLHHHHTT-EEaaaaaaxbx
1l1y_A_4631l1y   A471479DWVMSEIKLHHHHTT-EEaaaaaaxbb
1omh_A_1041omh   A119127EQAEARAQAHHHHTT-EEaaaaaaxbb
1pug_A_181pug   A2533QEEIAQLEVHHHHHT-EEaaaaaaxbb
1q0b_A_3431q0b   A353361AHRAKNILNHHHHTT-EEaaaaaaxbb
1qba_*_291qba   -3240VDQLSQLKLHHHHTT-EEaaaaaaxbx
1qht_A_481qht   A4856IEDVKKVTAHHHHTT-EEaaaaaaxbb
1r2j_A_2191r2j   A245253VAHARTREQHHHHTT-EEaaaaaaxbb
1usu_A_4361usu   A437445AALAKLLRYHHHHTT-EEaaaaaaxbb
2mas_A_1912mas   A191199LDLTHQALAHHHHTT-EEaaaaaaxxx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dkf_B_2541dkf   B     BMS4-[(4,4-DIMETHYL-1,2,3,4-TETRAHYDRO-[1,2'] BINAPTHALENYL-7-CARBONYL)-AMINO]-BENZOIC ACID L - 266
1dkf_B_2541dkf   B     BMS4-[(4,4-DIMETHYL-1,2,3,4-TETRAHYDRO-[1,2'] BINAPTHALENYL-7-CARBONYL)-AMINO]-BENZOIC ACID I - 268
1dkf_B_2541dkf   B     BMS4-[(4,4-DIMETHYL-1,2,3,4-TETRAHYDRO-[1,2'] BINAPTHALENYL-7-CARBONYL)-AMINO]-BENZOIC ACID L - 269
1dkf_B_2541dkf   B     BMS4-[(4,4-DIMETHYL-1,2,3,4-TETRAHYDRO-[1,2'] BINAPTHALENYL-7-CARBONYL)-AMINO]-BENZOIC ACID I - 270
1dkf_B_2541dkf   B     BMS4-[(4,4-DIMETHYL-1,2,3,4-TETRAHYDRO-[1,2'] BINAPTHALENYL-7-CARBONYL)-AMINO]-BENZOIC ACID L - 271
1dkf_B_2541dkf   B     BMS4-[(4,4-DIMETHYL-1,2,3,4-TETRAHYDRO-[1,2'] BINAPTHALENYL-7-CARBONYL)-AMINO]-BENZOIC ACID R - 272
1dkf_B_2541dkf   B     BMS4-[(4,4-DIMETHYL-1,2,3,4-TETRAHYDRO-[1,2'] BINAPTHALENYL-7-CARBONYL)-AMINO]-BENZOIC ACID I - 273
1dkf_B_2541dkf   B     BMS4-[(4,4-DIMETHYL-1,2,3,4-TETRAHYDRO-[1,2'] BINAPTHALENYL-7-CARBONYL)-AMINO]-BENZOIC ACID C - 274
1dkf_B_2541dkf   B     BMS4-[(4,4-DIMETHYL-1,2,3,4-TETRAHYDRO-[1,2'] BINAPTHALENYL-7-CARBONYL)-AMINO]-BENZOIC ACID R - 276
1k75_A_2961k75   A     MSESELENOMETHIONINE R - 306
1usu_A_4361usu   A     GOLGLYCEROL K - 441
1usu_A_4361usu   A     GOLGLYCEROL L - 442
1usu_A_4361usu   A     GOLGLYCEROL R - 444
2mas_A_1912mas   A     PIR2-(4-AMINO-PHENYL)-5-HYDROXYMETHYL-PYRROLIDINE-3,4-DIOL L - 191
2mas_A_1912mas   A     PIR2-(4-AMINO-PHENYL)-5-HYDROXYMETHYL-PYRROLIDINE-3,4-DIOL T - 194
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1usu_A_4361usu   A AC1GOL BINDING SITE FOR CHAIN AK - 441

Clusters included in this Subclass
CLUSTER: HE.2.109
CLUSTER: HE.3.66
CLUSTER: HE.4.69