Information on SUBCLASS 3.11.1 |
Subclass Accession number: 5534
Subclass: 3.11.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 13 Average sequence ID (%) : 19.2 +/- 18.1 Average RMSD (Å) : 0.615 +/- 0.146 Consensus geometry
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Consensus Sequence: | XhGpphX |
(φψ)-conformation: | aaeaabb |
Pattern: | x | x | x | x | [iltv] | [aeklm] | [ADGKNRT] | x | [agily] | [GK] | [DEKRS] | [dknrsy] | [AFILV] | x |
Conservation: | -0.725 | -0.608 | -0.629 | -0.727 | 0.600 | -0.430 | -0.176 | -0.749 | -0.344 | 2.862 | 1.059 | -0.220 | 0.571 | -0.485 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bdb_*_39 | 1bdb | - | 41 | 54 | RLAELETDHGDNVL | HHHHHHHHHGGGEE | aaaaaaaaaeaabb |
1chd_*_260 | 1chd | - | 263 | 276 | LFHSVAKHAGRNAV | HHHHHHHHTGGGEE | aaaaaaaaaeaabb |
1f0k_A_196 | 1f0k | A | 201 | 214 | TMPQVAAKLGDSVT | HHHHHHHHHGGGEE | aaaaaaaaaeaabb |
1ffv_C_14 | 1ffv | C | 16 | 29 | EAVALLGQLGSDAK | HHHHHHHHHGGGEE | aaaaaaaaaeaabb |
1gpm_A_238 | 1gpm | A | 243 | 256 | TAMLLHRAIGKNLT | HHHHHHHHHGGGEE | aaaaaaaaaeaaxb |
1k8k_D_72 | 1k8k | D | 72 | 85 | ADELLKRVYGSYLV | HHHHHHHHHGGGEE | aaaaaaaaaeaaxb |
1kny_A_9 | 1kny | A | 19 | 32 | IKERILDKYGDDVK | HHHHHHHHHGGGEE | aaaaaaaaaeaaxa |
1lrz_A_222 | 1lrz | A | 224 | 237 | FYYNRLKYYKDRVL | HHHHHHHHHGGGEE | aaaaaaaaaeaabb |
1n62_C_14 | 1n62 | C | 16 | 29 | DAVALLTKLGEDAR | HHHHHHHHHGGGEE | aaaaaaaaaeaabb |
1pq4_A_56 | 1pq4 | A | 58 | 71 | QQYFLEKIGGDLVR | HHHHHHHHHGGGEE | aaaaaaaaaeaabb |
1psz_A_40 | 1psz | A | 42 | 55 | IADITKNIAGDKID | HHHHHHHHHGGGEE | aaaaaaaaaeaabb |
1s3e_A_215 | 1s3e | A | 217 | 230 | VSERIMDLLGDRVK | HHHHHHHHHGGGEE | aaaaaaaaaeaaxb |
1s5p_A_108 | 1s5p | A | 112 | 125 | ALAKLQDALGDRFL | HHHHHHHHHGGGEE | aaaaaaaaaeaabb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1bdb_*_39 | 1bdb | * | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | R - 41 |
1ffv_C_14 | 1ffv | C | FADFLAVIN-ADENINE DINUCLEOTIDE | K - 29 |
1ffv_C_14 | 1ffv | C | FADFLAVIN-ADENINE DINUCLEOTIDE | L - 30 |
1ffv_C_14 | 1ffv | C | FADFLAVIN-ADENINE DINUCLEOTIDE | L - 31 |
1gpm_A_238 | 1gpm | A | POPPYROPHOSPHATE 2- | V - 238 |
1gpm_A_238 | 1gpm | A | POPPYROPHOSPHATE 2- | D - 239 |
1gpm_A_238 | 1gpm | A | AMPADENOSINE MONOPHOSPHATE | D - 239 |
1gpm_A_238 | 1gpm | A | POPPYROPHOSPHATE 2- | S - 240 |
1gpm_A_238 | 1gpm | A | AMPADENOSINE MONOPHOSPHATE | S - 240 |
1gpm_A_238 | 1gpm | A | POPPYROPHOSPHATE 2- | S - 241 |
1gpm_A_238 | 1gpm | A | AMPADENOSINE MONOPHOSPHATE | V - 258 |
1gpm_A_238 | 1gpm | A | AMPADENOSINE MONOPHOSPHATE | F - 259 |
1gpm_A_238 | 1gpm | A | AMPADENOSINE MONOPHOSPHATE | V - 260 |
1gpm_A_238 | 1gpm | A | AMPADENOSINE MONOPHOSPHATE | D - 261 |
1kny_A_9 | 1kny | A | APCDIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER | Y - 37 |
1kny_A_9 | 1kny | A | MGMAGNESIUM ION | Y - 37 |
1n62_C_14 | 1n62 | C | FADFLAVIN-ADENINE DINUCLEOTIDE | R - 29 |
1n62_C_14 | 1n62 | C | FADFLAVIN-ADENINE DINUCLEOTIDE | P - 30 |
Clusters included in this Subclass |
CLUSTER: HE.2.156 |
CLUSTER: HE.2.56 |
CLUSTER: HE.3.83 |