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Information on SUBCLASS 2.2.7
Subclass Accession number: 6052
Subclass: 2.2.7 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 26

Average sequence ID (%) : 19.4 +/- 18.6
Average RMSD (Å) : 0.581 +/- 0.200

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XXppGX
(φψ)-conformation: bbaaeb
Pattern: xx[acdgnstv][adeknrst]x[GS][fikltv]x[acfgilmvy]
Conservation:-0.519-0.359-0.368-0.126-0.4072.650-0.329-0.338-0.204
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1as4_A_3271as4   A339347DVFEEGTEAEE-SSEEEEbbbaaebbb
1bkz_A_841bkz   A9199IASDDGFKAEE-SSEEEEbxbaaebxb
1c9o_A_461c9o   A5260VQGNRGPQAEEETTEEEEbbbaaewbx
1d5a_A_5351d5a   A538546YADTDGFFAEE-SSEEEEbbbaaebbb
1dto_A_1511dto   A151159QVDYYGLYYEE-SSEEEEbbbaaebbb
1fiq_B_2901fiq   B291299EHGPEGISFEE-SSEEEEbbxaaebbb
1g0u_B_371g0u   B4048IMASDGIVLEE-SSEEEEbxxaaebbb
1g0u_F_371g0u   F4048IKCNDGVVFEE-SSEEEEbxbaaebbb
1gkl_A_8281gkl   A834842YTGINGTKSEEETTEEEEbbbaaexbb
1h4r_A_2311h4r   A235243GVDALGLHIEE-SSEEEEbbbaaebbb
1hle_A_3271hle   A339347DLNEEGTEAEE-SSEEEEbbbaaebbb
1iz5_A_261iz5   A3038KVTEDGISMEE-SSEEEExbbaaebbb
1izn_B_1161izn   B122130WDLDHGFAGEE-SSEEEEbxbaaebbb
1j58_A_2361j58   A236244IESEGGKVYEE-SSEEEExxbaaebbb
1jq6_A_741jq6   A7684QSVRDGLFCEE-SSEEEEbxbaaexxb
1jti_A_3211jti   A333341EINEAGTEVEE-SSEEEEbbbaaebbb
1lj5_A_3171lj5   A327335EVNESGTVAEE-SSEEEEbbbaaebbb
1m2r_A_391m2r   A4654GRGKYSEVFEE-SSEEEEbbbaaebbb
1olt_A_4161olt   A417425DVDEKGIQVEE-SSEEEExbbaaebbx
1r0u_A_381r0u   A4553EEHDLGKVKEEETTEEEEbbbaaexbx
1r3c_A_241r3c   A3139GSGAYGSVCEE-SSEEEEebbaaebbb
1rjb_A_6101rjb   A617625GSGAFGKVMEE-SSEEEEebbaaebbb
1sfe_*_151sfe   -1927ADCELGRCLEEETTEEEEbxbaaexbb
1xyn_*_141xyn   -1826SPSNTGFSVEE-SSEEEEbwbaaebbb
2aps_A_292aps   A3745TESAYGLVFEEETTEEEEbbbaaexbb
4ubp_A_794ubp   A8492ATFPDGTKLEEETTEEEEbxxaaexbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1as4_A_3271as4   A     ACTACETATE ION V - 337
1as4_A_3271as4   A     ACTACETATE ION L - 338
1as4_A_3271as4   A     ACTACETATE ION T - 345
1as4_A_3271as4   A     ACTACETATE ION E - 346
1as4_A_3271as4   A     ACTACETATE ION A - 347
1as4_A_3271as4   A     ACTACETATE ION R - 349
1j58_A_2361j58   A     MSESELENOMETHIONINE G - 240
1jq6_A_741jq6   A     CASS-(DIMETHYLARSENIC)CYSTEINE L - 85
1lj5_A_3171lj5   A     DMSDIMETHYL SULFOXIDE Q - 319
1m2r_A_391m2r   A     MNY5,8-DI-AMINO-1,4-DIHYDROXY-ANTHRAQUINONE V - 45
1m2r_A_391m2r   A     MNY5,8-DI-AMINO-1,4-DIHYDROXY-ANTHRAQUINONE G - 46
1m2r_A_391m2r   A     MNY5,8-DI-AMINO-1,4-DIHYDROXY-ANTHRAQUINONE R - 47
1m2r_A_391m2r   A     MNY5,8-DI-AMINO-1,4-DIHYDROXY-ANTHRAQUINONE V - 53
1r0u_A_381r0u   A     GOLGLYCEROL Y - 43
1r0u_A_381r0u   A     GOLGLYCEROL E - 45
1r0u_A_381r0u   A     GOLGLYCEROL T - 54
1r0u_A_381r0u   A     GOLGLYCEROL V - 56
2aps_A_292aps   A     CUCOPPER (II) ION H - 48
2aps_A_292aps   A     CUCOPPER (II) ION L - 49

Clusters included in this Subclass
CLUSTER: HA.1.29
CLUSTER: HA.2.21
CLUSTER: HA.4.32