Information on SUBCLASS 4.1.7 |
Subclass Accession number: 6242
Subclass: 4.1.7 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 27 Average sequence ID (%) : 11.6 +/- 15.9 Average RMSD (Å) : 0.496 +/- 0.261 Consensus geometry
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Consensus Sequence: | XpXXXchX |
(φψ)-conformation: | bbaaalbb |
Pattern: | x | [dhnrsty] | x | [adegkrst] | x | [DGKNQRST] | [fgilvy] | x |
Conservation: | -0.677 | 0.011 | 0.064 | -0.378 | -0.983 | 2.010 | 0.810 | -0.857 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a8d_*_293 | 1a8d | - | 295 | 302 | TNGKLNIY | EETTTTEE | bbaaalbb |
1arb_*_103 | 1arb | - | 108 | 115 | TYATSDFT | EETTTTEE | bbaaalbb |
1bd2_E_88 | 1bd2 | E | 95 | 102 | SYPGGGFY | EEGGGTEE | bbaaagxa |
1cu1_A_73 | 1cu1 | A | 76 | 83 | TNVDQDLV | EETTTTEE | bbaaavbb |
1dvp_A_194 | 1dvp | A | 197 | 204 | PLPKYGIE | EEGGGTEE | xbaaavba |
1ewq_A_143 | 1ewq | A | 148 | 155 | LDVSTGEF | EETTTTEE | bbaaavpb |
1f0i_A_505 | 1f0i | A | 505 | 512 | VDYARGIC | EEGGGTEE | bbaaavxb |
1frd_*_2 | 1frd | - | 8 | 15 | INKKQDID | EETTTTEE | bbaaalbb |
1h8d_H_60 | 1h8d | H | 60 | 67 | LYPPWDKN | EEGGGTEE | bbaaalxb |
1i1q_B_152 | 1i1q | B | 157 | 164 | RHDADRVC | EETTTTEE | bbaaavbb |
1i7q_B_155 | 1i7q | B | 160 | 167 | RDDRRRVC | EETTTTEE | bbaaalbb |
1iby_A_60 | 1iby | A | 63 | 70 | SIDAFGVQ | EEGGGTEE | bbaaalxb |
1itk_A_581 | 1itk | A | 581 | 588 | VDGVRNYI | EETTTTEE | bbaaalbb |
1kl9_A_71 | 1kl9 | A | 75 | 82 | VDKEKGYI | EETTTTEE | bbaaavxb |
1l3a_A_200 | 1l3a | A | 208 | 215 | QNKLINLD | EEGGGTEE | bbaaalxb |
1lc0_A_183 | 1lc0 | A | 191 | 198 | ERKEDQYM | EEGGGTEE | bbaaalbb |
1leh_A_14 | 1leh | A | 19 | 26 | QDEASGLK | EETTTTEE | bbaaavxb |
1mwv_A_598 | 1mwv | A | 598 | 605 | ADGFRNYL | EEGGGTEE | bbaaalbb |
1nlq_A_48 | 1nlq | A | 54 | 61 | NTPKDSVQ | EEGGGTEE | bbaaalxb |
1obd_A_211 | 1obd | A | 222 | 229 | IDEKTNEI | EETTTTEE | bxaaalbx |
1olz_A_261 | 1olz | A | 261 | 268 | SRPDSGLV | EEGGGTEE | bbaaavxb |
1st0_A_48 | 1st0 | A | 55 | 62 | ESARDKII | EETTTTEE | bbaaavbb |
1tfr_*_195 | 1tfr | - | 196 | 203 | GDKKDNVA | EEGGGTEE | ebaaavxb |
1ub2_A_572 | 1ub2 | A | 572 | 579 | HDAIATGS | EEGGGTEE | bbaaalbb |
1ux6_A_1089 | 1ux6 | A | 1096 | 1103 | HRPKTGFI | EETTTTEE | bbaaavxb |
1v54_B_161 | 1v54 | B | 164 | 171 | AVPSLGLK | EEGGGTEE | bbaaavbb |
1vfy_A_206 | 1vfy | A | 209 | 216 | PLPDLGIY | EEGGGTEE | xbaaavba |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1obd_A_211 | 1obd | A | AC2ATP BINDING SITE FOR CHAIN A | E - 219 |
1vfy_A_206 | 1vfy | A | POSRKHHCR MOTIF ; PUTATIVE PI3P BINDING SITE | R - 220 |
Clusters included in this Subclass |
CLUSTER: HA.3.34 |
CLUSTER: HA.5.27 |