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Information on SUBCLASS 2.7.1
Subclass Accession number: 7823
Subclass: 2.7.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 22

Average sequence ID (%) : 9.6 +/- 13.2
Average RMSD (Å) : 0.427 +/- 0.200

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XpXpXX
(φψ)-conformation: bbGabb
Pattern: xxxx[degknqst]xx[afilvwy]
Conservation:-0.363-1.011-0.046-0.6522.144-0.589-0.1530.670
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a6q_*_1821a6q   -182187.VMIQRV..EETTEE..bbGabx.
1cf5_A_701cf5   A7481YRTRDVSYEEETTEEEbbbGabbb
1clx_A_521clx   A5257.YSGSNF..EETTEE..bbGaxx.
1cvu_A_3951cvu   A395402FNIEDQEYEEETTEEEbxbGaxbb
1egz_A_51egz   A613SVNGNKIYEEETTEEEbbbGabbx
1f1s_A_7591f1s   A766773VILNDKIVEEETTEEEbxbGabbx
1ffv_B_6001ffv   B601608DWEVDRFKEE-SSEEEbxbGabbb
1h10_A_721h10   A7784CLQWTTVIEEETTEEEbxbGabxb
1ih7_A_6171ih7   A619626YGDTDSIYEEETTEEEbbbGabbb
1k3b_A_381k3b   A4451LQKLDTAYEETTTEEEbbpGaxbb
1lvl_*_2341lvl   -237244GYENGCLLEEETTEEEbbxGabbb
1m6b_A_2761m6b   A276283VVDQTSCVEEETTEEEbxbGaxxb
1nyr_A_1701nyr   A172179YSQGDFTDEEETTEEExbbGabbb
1oac_A_1511oac   A156163MLDGKHIIEEETTEEEbbbGaxxb
1og5_A_4721og5   A472479VVNGFASVEE-SS-EEbbbGabxb
1pex_*_3881pex   -391398LFSGNQVWEEETTEEExbbGabbb
1pfq_A_671pfq   A7077YKQENNILEEETTEEEbxbGabbb
1qdl_A_2081qdl   A212219LKFDEKYLEEETTEEEbbbGabbb
1qht_A_2401qht   A242249QRMGDRFAEEETTEEEbxbGabbb
1rpa_*_2811rpa   -287294YQDNGGHFEE-SSSEEbbbGaxbb
1rpm_A_10161rpm   A10171024EIYKDIKVEEETTEEEbbbGabxb
1tgo_A_5351tgo   A538545YADTDGFFEEESSEEEbbbGabbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a6q_*_1821a6q   *     PO4PHOSPHATE ION R - 186
1cvu_A_3951cvu   A     NAGN-ACETYL-D-GLUCOSAMINE Q - 400
1cvu_A_3951cvu   A     NAGN-ACETYL-D-GLUCOSAMINE Y - 402
1h10_A_721h10   A     MSESELENOMETHIONINE T - 72
1h10_A_721h10   A     MSESELENOMETHIONINE F - 73
1h10_A_721h10   A     MSESELENOMETHIONINE I - 74
1h10_A_721h10   A     MSESELENOMETHIONINE I - 75
1h10_A_721h10   A     MSESELENOMETHIONINE R - 76
1h10_A_721h10   A     ITSINOSITOL 1,3,4,5-TETRAKISPHOSPHATE Q - 79
1h10_A_721h10   A     ITSINOSITOL 1,3,4,5-TETRAKISPHOSPHATE I - 84
1h10_A_721h10   A     MSESELENOMETHIONINE E - 85
1h10_A_721h10   A     ITSINOSITOL 1,3,4,5-TETRAKISPHOSPHATE R - 86
1lvl_*_2341lvl   *     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE S - 234
1lvl_*_2341lvl   *     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE V - 235
1nyr_A_1701nyr   A     ZNZINC ION Y - 172
1nyr_A_1701nyr   A     ZNZINC ION L - 180
1og5_A_4721og5   A     SWFS-WARFARIN F - 476
1pfq_A_671pfq   A     NAGN-ACETYL-D-GLUCOSAMINE E - 67
1pfq_A_671pfq   A     NAGN-ACETYL-D-GLUCOSAMINE V - 78
1pfq_A_671pfq   A     NAGN-ACETYL-D-GLUCOSAMINE F - 79
1pfq_A_671pfq   A     NAGN-ACETYL-D-GLUCOSAMINE N - 80
1rpa_*_2811rpa   *     NAGN-ACETYL-D-GLUCOSAMINE Y - 299

Clusters included in this Subclass
CLUSTER: HA.1.12
CLUSTER: HA.1.48
CLUSTER: HA.2.15
CLUSTER: HA.3.21