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Information on SUBCLASS 8.2.1
Subclass Accession number: 8009
Subclass: 8.2.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 78.6 +/- -1.8
Average RMSD (Å) : 0.200 +/- 0.082

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: hDPhTRhEGHLp
(φψ)-conformation: bbwpplbpepbb
Pattern: [KP][I][SV][IV][D][P][ILV][T][R][IV][E][G][H][L][KR][I][EM][V][E][V][EK]
Conservation:-1.046-0.120-1.894-0.4161.0671.661-0.8990.4730.473-0.4160.4731.0672.255-0.120-0.413-0.120-1.549-0.1200.473-0.120-0.709
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cc1_L_131cc1   L1333KISIDPLTRVEGHLKIEVEVKEEEESS--SSSS-EEEEEEEEbbbbbwxxlbxexbbbbbbbb
1frf_L_141frf   L1535PIVVDPITRIEGHLRIMVEVEEEEESS--SSBS-EEEEEEEExbbbbwxxlbbebbbbbbbbb
1ubk_L_231ubk   L2444PIVVDPVTRIEGHLRIEVEVEEEEESS--SSBS-EEEEEEEExbbbbwxxlbxebbbbbbbbb
2frv_B_82frv   B828KIVVDPITRIEGHLRIEVEVEEEEE-S--SSBS-EEEEEEEEbbbbbwxxlbbexbbbbbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cc1_L_131cc1   L     CSESELENOCYSTEINE V - 22
1cc1_L_131cc1   L     CSESELENOCYSTEINE E - 23
1cc1_L_131cc1   L     NINICKEL (II) ION E - 23
1cc1_L_131cc1   L     CSESELENOCYSTEINE G - 24
1frf_L_141frf   L     NINICKEL (II) ION E - 25
1ubk_L_231ubk   L     MPD2-METHYL-2,4-PENTANEDIOL P - 24
1ubk_L_231ubk   L     MPD2-METHYL-2,4-PENTANEDIOL I - 25
1ubk_L_231ubk   L     MPD2-METHYL-2,4-PENTANEDIOL V - 26
1ubk_L_231ubk   L     FNE(MU-SULPHIDO)-BIS(MU-CYS,S)-[TRICARBONYLIRON-DI-(CYS, S)NICKEL(II)](FE-NI) E - 34
1ubk_L_231ubk   L     CMOCARBON MONOXIDE E - 34
1ubk_L_231ubk   L     MPD2-METHYL-2,4-PENTANEDIOL R - 38
1ubk_L_231ubk   L     MPD2-METHYL-2,4-PENTANEDIOL E - 40
1ubk_L_231ubk   L     MPD2-METHYL-2,4-PENTANEDIOL V - 41
1ubk_L_231ubk   L     MPD2-METHYL-2,4-PENTANEDIOL E - 42
2frv_B_82frv   B     NINICKEL (II) ION E - 18
2frv_B_82frv   B     OOXYGEN ATOM E - 18

Clusters included in this Subclass
CLUSTER: HA.10.16