Home

Classification

Query

Statistics

Contact

Links

Help

PDB code:

Information on SUBCLASS 1.3.5

Subclass Accession number: 8166 Subclass: 1.3.5 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates:

Number of loops: 11 Average sequence ID (%) : 5.7 +/- 9.7 Average RMSD (Å) : 0.609 +/- 0.158 Consensus geometry d (Å): 7 delta (°): 0-45 theta (°): 0-45 rho (°): 135-180

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1ak2_*_133	1ak2	-	138	145	RRITGRLI	HHHHT-EE	aaaaaxbb
1arb_*_63	1arb	-	64	71	STAASIVV	HHHHT-EE	aaaaaxbx
1dmt_A_608	1dmt	A	623	630	YQYGNFSW	HHHHT-EE	aaaaaxbb
1i7d_A_123	1i7d	A	124	131	EKRQQVQR	HHHHT-EE	aaaaaxbb
1ivh_A_260	1ivh	A	275	282	PYLHVREA	HHHTT-EE	aaaaaxbb
1jqo_A_158	1jqo	A	163	170	EALKNQTV	HHHHT-EE	aaaaabbb
1khb_A_450	1khb	A	455	462	FVGAAMRS	HHHHT-EE	aaaaapbb
1qks_A_464	1qks	A	464	471	AEISGSVA	HHHHT-EE	aaaaabbx
1qmq_A_219	1qmq	A	221	228	SIVANGQV	HHHHT-EE	aaaaaxbb
1xva_A_105	1xva	A	105	112	PAFDKWVI	HHHHT-EE	aaaaaxxb
4ubp_C_486	4ubp	C	486	493	LIHDTNIT	HHHHS-EE	aaaaabbx

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1dmt_A_608	1dmt	A	NAGN-ACETYL-D-GLUCOSAMINE	V - 622
1dmt_A_608	1dmt	A	NAGN-ACETYL-D-GLUCOSAMINE	Y - 623
1dmt_A_608	1dmt	A	NAGN-ACETYL-D-GLUCOSAMINE	Q - 624
1dmt_A_608	1dmt	A	NAGN-ACETYL-D-GLUCOSAMINE	Y - 625
1dmt_A_608	1dmt	A	NAGN-ACETYL-D-GLUCOSAMINE	G - 626
1dmt_A_608	1dmt	A	NAGN-ACETYL-D-GLUCOSAMINE	N - 627
1ivh_A_260	1ivh	A	FADFLAVIN-ADENINE DINUCLEOTIDE	Y - 276
1ivh_A_260	1ivh	A	FADFLAVIN-ADENINE DINUCLEOTIDE	L - 277
1ivh_A_260	1ivh	A	FADFLAVIN-ADENINE DINUCLEOTIDE	R - 280
1ivh_A_260	1ivh	A	FADFLAVIN-ADENINE DINUCLEOTIDE	E - 281
1ivh_A_260	1ivh	A	FADFLAVIN-ADENINE DINUCLEOTIDE	A - 282
1khb_A_450	1khb	A	EDO1,2-ETHANEDIOL	W - 450
1khb_A_450	1khb	A	EDO1,2-ETHANEDIOL	Q - 451
1khb_A_450	1khb	A	EDO1,2-ETHANEDIOL	G - 453

Clusters included in this Subclass

CLUSTER: HE.1.30

CLUSTER: HE.3.61

For any comment or web-related incidence, send an email to the webmaster.