Information on SUBCLASS 7.4.1 |
Subclass Accession number: 8690
Subclass: 7.4.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 39.0 +/- 30.4 Average RMSD (Å) : 0.500 +/- 0.370 Consensus geometry
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Consensus Sequence: | XpXpXXhhXpX |
(φψ)-conformation: | aapppbpppbb |
Pattern: | [gilm] | [ade] | x | [iltv] | x | x | [aq] | x | [enqs] | [rw] | x | [pqt] | x | [aep] | [aflp] | [pq] | [ekrt] | [kl] | x | [il] |
Conservation: | -0.818 | 0.653 | -0.936 | 0.147 | -0.121 | -0.354 | 1.028 | 0.178 | 0.276 | 0.768 | -0.672 | 0.371 | -1.186 | 0.314 | -1.431 | 2.136 | -0.235 | 0.192 | -1.926 | 1.616 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bkp_A_228 | 1bkp | A | 228 | 247 | IDNLKIQMEREQFEAPELWI | HHHHHHHHHS------EEEE | aaaaaaaaaxxbbxxxxbxb |
1hvy_A_262 | 1hvy | A | 262 | 281 | IEPLKIQLQREPRPFPKLRI | HHHHHHHHTS------EEEE | aaaaaaaaaxxxbpxxbbbb |
1hw3_A_262 | 1hw3 | A | 262 | 281 | IEPLKIQLQREPRPFPKLRI | HHHHHHHTTS------EEEE | aaaaaaaaaxxxbppxbbbb |
1j3k_C_557 | 1j3k | C | 557 | 576 | IDSLKIQLNRIPYPFPTLKL | HHHHHHHTTS------EEEE | aaaaaaaaaxxpbpxxbbbb |
1p8j_A_431 | 1p8j | A | 432 | 451 | GAMVALAQNWTTVAPQRKCI | HHHHHHHHT-------EEEE | aaaaaaaaaxxpxxpxbbbb |
1qqq_A_213 | 1qqq | A | 213 | 232 | MDQTHLQLSREPRPLPKLII | HHHHHHHHTS------EEEE | aaaaaaaaaxxxbpxxbxbb |
1tsy_*_265 | 1tsy | - | 265 | 284 | LDQIKEQLSRTPRPAPTLQL | HHHHHHHTTS------EEEE | aaaaaaaaaxbpbpxxbxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1p8j_A_431 | 1p8j | A | NAGN-ACETYL-D-GLUCOSAMINE | A - 436 |
1p8j_A_431 | 1p8j | A | NAGN-ACETYL-D-GLUCOSAMINE | Q - 439 |
1p8j_A_431 | 1p8j | A | NAGN-ACETYL-D-GLUCOSAMINE | N - 440 |
1p8j_A_431 | 1p8j | A | FUCFUCOSE | N - 440 |
1qqq_A_213 | 1qqq | A | CXMN-CARBOXYMETHIONINE | Q - 219 |
1qqq_A_213 | 1qqq | A | CXMN-CARBOXYMETHIONINE | P - 224 |
1qqq_A_213 | 1qqq | A | CXMN-CARBOXYMETHIONINE | R - 225 |
1qqq_A_213 | 1qqq | A | CXMN-CARBOXYMETHIONINE | L - 227 |
Clusters included in this Subclass |
CLUSTER: HE.7.68 |
CLUSTER: HE.8.13 |