Information on SUBCLASS 2.6.2 |
Subclass Accession number: 8962
Subclass: 2.6.2 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 26.5 +/- 30.8 Average RMSD (Å) : 0.640 +/- 0.114 Consensus geometry
|
Consensus Sequence: | pppphp |
(φψ)-conformation: | aalbaa |
Pattern: | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x |
Conservation: | -0.581 | -0.549 | -0.534 | -0.314 | 1.201 | 0.429 | -0.469 | -0.326 | -0.995 | 1.850 | -1.050 | -0.214 | 2.564 | -1.162 | -0.660 | -0.604 | -0.093 | 1.201 | -0.194 | 0.501 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1f7u_A_534 | 1f7u | A | 534 | 553 | YPDVLRNAIKTHEPTTVVTY | HHHHHHHHHHH--HHHHHHH | aaaaaaaaaaavbaaaaaaa |
1qht_A_617 | 1qht | A | 623 | 642 | QARVLEAILKHGDVEEAVRI | HHHHHHHHHHH--HHHHHHH | aaaaaaaaaaalbaaaaaaa |
1qsa_A_69 | 1qsa | A | 75 | 94 | QSRFVNELARREDWRGLLAF | HHHHHHHHHHTT-HHHHHHH | aaaaaaaaaaavxaaaaaaa |
1tgo_A_617 | 1tgo | A | 623 | 642 | QARVLEAILKHGDVEEAVRI | HHHHHHHHHTT--HHHHHHH | aaaaaaaaaaavbaaaaaaa |
2occ_E_45 | 2occ | E | 48 | 67 | IDAALRACRRLNDFASAVRI | HHHHHHHHHHTT-HHHHHHH | aaaaaaaaaaalbaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1f7u_A_534 | 1f7u | A | DHU5,6-DIHYDROURIDINE-5'-PHOSPHATE | N - 540 |
1f7u_A_534 | 1f7u | A | DHU5,6-DIHYDROURIDINE-5'-PHOSPHATE | K - 543 |
Clusters included in this Subclass |
CLUSTER: HH.2.121 |
CLUSTER: HH.4.123 |