Information on SUBCLASS 5.1.1 |
Subclass Accession number: 696
Subclass: 5.1.1 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 47 Average sequence ID (%) : 15.0 +/- 16.9 Average RMSD (Å) : 0.479 +/- 0.167 Consensus geometry
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Consensus Sequence: | XXpXpcXXX |
(φψ)-conformation: | bbpaagppb |
Pattern: | x | x | [dgnqst] | x | [adeknqst] | [adgknq] | [cehknqrty] | x | x |
Conservation: | -0.594 | -0.862 | 1.189 | -0.245 | 1.123 | 1.558 | -0.386 | -0.891 | -0.894 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1arb_*_197 | 1arb | - | 198 | 206 | IYSPEKRVL | EE-TTS-EE | bbxaavbxa |
1bco_*_543 | 1bco | - | 546 | 554 | CYTLDGRFI | EE-TTS-EE | xbxaavxxa |
1d8c_A_346 | 1d8c | A | 349 | 357 | IWDSEGNEI | EE-TTS-EE | bbxaavxxx |
1dmg_A_3 | 1dmg | A | 6 | 14 | LLNVKGEKV | EE-TTS-EE | bbbaavxxa |
1dvo_A_142 | 1dvo | A | 143 | 151 | RYDTEGYVT | EE-TTS-EE | xbbaavxxa |
1e79_A_52 | 1e79 | A | 53 | 61 | VEFSSGLKG | EEETTS-EE | bbxaagxxb |
1ehi_A_298 | 1ehi | A | 305 | 313 | LLDENNVPY | EE-TT--EE | bbxaavxwb |
1ei5_A_486 | 1ei5 | A | 493 | 501 | RRDDKGEIT | EE-TTS-EE | bbxaavxxa |
1elu_A_254 | 1elu | A | 255 | 263 | TYGAKGEPT | EE-TTS-EE | bbxaavxwa |
1eur_*_221 | 1eur | - | 227 | 235 | IINAAGAFQ | EE-TT--EE | bbxaavxxb |
1f61_A_249 | 1f61 | A | 252 | 260 | ERTREGFYR | EE-TTS-EE | xbxaavxxx |
1f7s_A_66 | 1f7s | A | 74 | 82 | FVTAENCQK | EE-TTS-EE | bbxaalbxb |
1f89_A_109 | 1f89 | A | 115 | 123 | IFNEDGKLI | EE-TTS-EE | bbbaagxxa |
1g97_A_140 | 1g97 | A | 142 | 150 | VRNDNAEVL | EE-TT--EE | xbxaalxxa |
1gxr_A_753 | 1gxr | A | 756 | 764 | TGSGDKKAT | EEETTS-EE | bbbaalbbb |
1hqz_1_32 | 1hqz | 1 | 36 | 44 | SPNAKKEYE | EE-TTS-EE | bxxaavxxb |
1i7d_A_220 | 1i7d | A | 228 | 236 | IVTPADERF | EE-TT--EE | xbxaavxbb |
1iq8_A_543 | 1iq8 | A | 546 | 554 | VVNENDELL | EE-TT--EE | xbxaavxpa |
1jj2_C_2 | 1jj2 | C | 5 | 13 | IYDLDGNTD | EE-TTS-EE | xbxaavxpb |
1jke_A_55 | 1jke | A | 55 | 63 | FSDAEGKMN | EE-TTS-EE | bxxaagbxa |
1jpm_A_25 | 1jpm | A | 36 | 44 | ITYDSGAVG | EEETTS-EE | bbbaagxbb |
1jyk_A_137 | 1jyk | A | 139 | 147 | VYGDDYKVQ | EE-TT-BEE | bbbaavxxa |
1k8w_A_290 | 1k8w | A | 296 | 304 | EIDDEGRVA | EE-TTS-EE | bxxaavbpx |
1lml_*_226 | 1lml | - | 231 | 239 | QTFSDGHPA | EE-TTS-EE | bbxaavxwa |
1lrz_A_112 | 1lrz | A | 115 | 123 | YLNHDGEIT | EE-TTS-EE | bbbaavxxa |
1lur_A_1183 | 1lur | A | 1188 | 1196 | EVDDTFCPT | EE-TTS-EE | xbxaavbpa |
1ly2_A_109 | 1ly2 | A | 111 | 119 | WCQANNMWG | EE-TTSSEE | bxxaavbxb |
1m4l_A_33 | 1m4l | A | 39 | 47 | GRSYEGRPI | EE-TTS-EE | ebxaavxxb |
1mrj_*_208 | 1mrj | - | 215 | 223 | LINAQNQRV | EE-TTS-EE | bbxaavxxb |
1mwv_A_350 | 1mwv | A | 353 | 361 | TKSPAGAHQ | EE-TT--EE | bbxaavxxb |
1nv8_A_263 | 1nv8 | A | 265 | 273 | LKDSAGKYR | EE-TTSSEE | bxxaavbxa |
1nx9_A_75 | 1nx9 | A | 82 | 90 | VPMRDGVKL | EE-TTS-EE | xxxaavxxb |
1o1z_A_31 | 1o1z | A | 37 | 45 | RLSKDGKVV | EE-TTS-EE | bbxaavxxb |
1o50_A_116 | 1o50 | A | 119 | 127 | VVDEKGEIV | EE-TTS-EE | bbxaavbxa |
1ocv_A_98 | 1ocv | A | 102 | 110 | RFNGAGKVV | EE-TTS-EE | bbxaavxxa |
1onw_A_356 | 1onw | A | 358 | 366 | VMTPELRIE | EE-TT--EE | bbxaavbxa |
1orv_A_370 | 1orv | A | 375 | 383 | ISNEEGYKH | EE-TTS-EE | bxxaavxxb |
1p1j_A_114 | 1p1j | A | 118 | 126 | GIDAEGNDV | EE-TTS-EE | ebxaavbpb |
1p3c_A_174 | 1p3c | A | 175 | 183 | MLDQNQQIV | EE-TTS-EE | xbxaavxxa |
1prx_A_133 | 1prx | A | 136 | 144 | VFGPDKKLK | EE-TTSBEE | bbxaavxxa |
1pvm_A_102 | 1pvm | A | 105 | 113 | VVDDPGRVV | EE-TT--EE | bbxaagxxa |
1pvm_A_154 | 1pvm | A | 157 | 165 | VYNEKGEIK | EE-TTS-EE | bbbaavxxa |
1skz_*_41 | 1skz | - | 42 | 50 | QRSRYGCEF | EE-TTS-EE | xbxaagbxb |
1skz_*_96 | 1skz | - | 97 | 105 | KRDKLGCEY | EE-TTS-EE | xbxaavbxb |
1st9_A_141 | 1st9 | A | 144 | 152 | LINPEGKVV | EE-TTSEEE | bbxaavbxa |
1ut9_A_240 | 1ut9 | A | 243 | 251 | LKNAAGVVV | EE-TTS-EE | xbxaavxxa |
2ptd_*_65 | 2ptd | - | 71 | 79 | RLTDDNTIV | EE-TTS-EE | bxbaavbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
2ptd_*_65 | 2ptd | * | ACTACTIVE SITE. | H - 82 |
Clusters included in this Subclass |
CLUSTER: HA.4.12 |
CLUSTER: HA.4.90 |
CLUSTER: HA.4.96 |
CLUSTER: HA.5.42 |
CLUSTER: HA.6.44 |
CLUSTER: HA.6.66 |