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PDB code:

Information on SUBCLASS 2.1.3

Subclass Accession number: 1637 Subclass: 2.1.3 Type: AR beta-beta link DB: ArchDB40 Image coordinates: Consensus coordinates:

Number of loops: 27 Average sequence ID (%) : 7.9 +/- 11.9 Average RMSD (Å) : 0.644 +/- 0.174 Consensus geometry d (Å): 9 delta (°): 0-45 theta (°): 45-90 rho (°): 90-135

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1bkb_*_77	1bkb	-	81	86	AQILSV..	EE--EE..	bbxabb..
1bnd_A_35	1bnd	A	37	43	TVLEKVP.	EE-SEEE.	xxxabbx.
1c4q_A_161	1c4q	A	161	168	GGFSEVIF	EE--EEEE	xxbabbbb
1d2e_A_259	1d2e	A	260	267	LPVESVYS	EE--EEEE	bxxabbbb
1d5t_A_102	1d5t	A	103	110	KVVEGSFV	EE--EEEE	bxxabbbb
1dar_*_348	1dar	-	350	357	ERVARLLR	EE--EEEE	bbxabbbb
1dar_*_484	1dar	-	485	492	ETITKPVD	EE-SS-EE	bbbabwbb
1dyp_A_159	1dyp	A	163	168	EIDVVE..	EE-SEE..	bbbabb..
1exm_A_222	1exm	A	223	230	MPVEDVFT	EE--EEEE	bxxabbbb
1eyq_A_13	1eyq	A	14	20	EYPAVVT.	EE-SEEE.	xbpabbb.
1fp3_A_224	1fp3	A	224	230	AVLENVS.	EE-SEEE.	bbbabbx.
1gs5_A_142	1gs5	A	144	150	VVSSIGV.	EE-SEEE.	bbxaxbb.
1hrn_A_281	1hrn	A	282	288	CTLAIHA.	EEBSEEE.	bxbabbb.
1jhd_A_111	1jhd	A	115	122	MDIEAIEE	EE--EEEE	bbxabbbx
1jlr_A_218	1jlr	A	218	223	AVDICL..	EE-SEE..	bbxabb..
1k82_A_46	1k82	A	46	53	QPVLSVQR	EEB-EEEE	bxxabbbb
1ko7_A_221	1ko7	A	222	229	KRLRLNIH	EE--EEEE	bxxabbbb
1n0u_A_426	1n0u	A	429	436	KAIQRVVL	EE--EEEE	bxpabbbx
1o5o_A_183	1o5o	A	183	188	ALDERL..	EE-SEE..	bbxabb..
1p3c_A_146	1p3c	A	150	155	GSVTRE..	EE--EE..	bxxabb..
1p80_A_647	1p80	A	648	653	LPIAAT..	EE--EE..	bxxabx..
1q16_A_1221	1q16	A	1225	1230	RKMKNI..	EE-SEE..	bxxaxb..
1q2b_A_202	1q2b	A	202	209	GIGGHGSC	EE-SEEEE	bbbabbbb
1sgp_E_41	1sgp	E	42	49	CSLGFNVR	EE--EEEE	bbxabxbb
1ug9_A_493	1ug9	A	493	498	YYLRIS..	EE-SEE..	bxxabb..
1v47_A_80	1v47	A	85	92	LHVAEAYE	EE--EEEE	bbpabbbb
2hlc_A_81	2hlc	A	83	90	VNSERIIS	EE-SEEEE	bxxabbbx

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1bkb_*_77	1bkb	*	MSESELENOMETHIONINE	F - 79
1bkb_*_77	1bkb	*	MSESELENOMETHIONINE	T - 80
1bkb_*_77	1bkb	*	MSESELENOMETHIONINE	A - 81
1bkb_*_77	1bkb	*	MSESELENOMETHIONINE	Q - 82
1bkb_*_77	1bkb	*	MSESELENOMETHIONINE	I - 83
1bkb_*_77	1bkb	*	MSESELENOMETHIONINE	L - 84
1bkb_*_77	1bkb	*	MSESELENOMETHIONINE	V - 86
1c4q_A_161	1c4q	A	GALD-GALACTOSE	G - 161
1c4q_A_161	1c4q	A	GALD-GALACTOSE	G - 162
1c4q_A_161	1c4q	A	GALD-GALACTOSE	F - 163
1c4q_A_161	1c4q	A	GALD-GALACTOSE	S - 164
1c4q_A_161	1c4q	A	GALD-GALACTOSE	E - 165
1dyp_A_159	1dyp	A	MSESELENOMETHIONINE	Y - 161
1dyp_A_159	1dyp	A	MSESELENOMETHIONINE	S - 162
1dyp_A_159	1dyp	A	MSESELENOMETHIONINE	E - 163
1dyp_A_159	1dyp	A	CDCADMIUM ION	E - 163
1dyp_A_159	1dyp	A	MSESELENOMETHIONINE	I - 164
1dyp_A_159	1dyp	A	MSESELENOMETHIONINE	D - 165
1dyp_A_159	1dyp	A	CDCADMIUM ION	D - 165
1dyp_A_159	1dyp	A	MSESELENOMETHIONINE	V - 166
1dyp_A_159	1dyp	A	CDCADMIUM ION	E - 168
1gs5_A_142	1gs5	A	NLGN-ACETYL-L-GLUTAMATE	S - 147
1jlr_A_218	1jlr	A	PO4PHOSPHATE ION	L - 223
1o5o_A_183	1o5o	A	U5PURIDINE-5'-MONOPHOSPHATE	L - 188
1q2b_A_202	1q2b	A	COCOBALT (II) ION	G - 205
1q2b_A_202	1q2b	A	COCOBALT (II) ION	H - 206
1sgp_E_41	1sgp	E	PO4PHOSPHATE ION	R - 41

Clusters included in this Subclass

CLUSTER: AR.1.10

CLUSTER: AR.3.15

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