Information on SUBCLASS 3.1.3 |
Subclass Accession number: 4649
Subclass: 3.1.3 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 76 Average sequence ID (%) : 16.6 +/- 23.2 Average RMSD (Å) : 0.661 +/- 0.216 Consensus geometry
|
Consensus Sequence: | pXXhpXX |
(φψ)-conformation: | aalppaa |
Pattern: | x | x | x | x | [adegknqrst] | x | x | [afilmvwy] | [dgnpqst] | x | x | x | [cfgilmvy] | x |
Conservation: | -0.633 | -0.634 | -0.404 | -0.839 | 0.496 | -0.655 | 0.869 | 1.478 | 1.332 | -1.482 | 0.221 | 0.573 | 1.127 | -1.450 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a4f_A_81 | 1a4f | A | 86 | 99 | LHAQKLRVDPVNFK | HHHTTS---THHHH | aaaaaalxxaaaaa |
1a6m_*_83 | 1a6m | - | 92 | 105 | SHATKHKIPIKYLE | HHHHTS---HHHHH | aaaaaalbxaaaaa |
1afw_A_186 | 1afw | A | 192 | 205 | NVAANFKISRKDQD | HHHHHTT--HHHHH | aaaaaalxxaaaaa |
1aog_A_434 | 1aog | A | 442 | 455 | GICLKLNAKISDFY | HHHHHTT-BHHHHH | aaaaaavxbaaaaa |
1b0b_*_82 | 1b0b | - | 94 | 107 | ANHKARGISAGQLE | HHHHHTT--HHHHH | aaaaaavxxaaaaa |
1b0n_A_76 | 1b0n | A | 83 | 96 | RDAMTSGVSKKQFR | HHHHHS---HHHHH | aaaaaavxxaaaaa |
1b0n_B_13 | 1b0n | B | 20 | 33 | VEAKEANISPEEIR | HHHHHTT--HHHHH | aaaaaavxxaaaaa |
1bf6_A_265 | 1bf6 | A | 267 | 280 | PQLRQSGFSQADVD | HHHHHTT--HHHHH | aaaaaagxxaaaaa |
1cg5_A_77 | 1cg5 | A | 87 | 100 | KHGENLLVDPHNFH | HHHHTT---THHHH | aaaaaalxpaaaaa |
1cg5_B_82 | 1cg5 | B | 86 | 99 | GKHQEIGVDTQNFK | HHHHHHT--THHHH | aaaaaagxxaaaaa |
1ch4_A_81 | 1ch4 | A | 91 | 104 | LHCDKLRVDPVNFK | HHHHTT---HHHHH | aaaaaalxxaaaaa |
1d8u_A_98 | 1d8u | A | 106 | 119 | ATHLKYGVGDAHFE | HHHHHTT--HHHHH | aaaaaavxbaaaaa |
1dmh_A_28 | 1dmh | A | 43 | 56 | KAIEDLNITSDEYW | HHHHHTT--HHHHH | aaaaaalxxaaaaa |
1dnp_A_341 | 1dnp | A | 350 | 363 | FLVKDLLIDWREGE | HHHHTS---HHHHH | aaaaaalxpaaaaa |
1eex_A_453 | 1eex | A | 461 | 474 | QEIINKNRNGLEVV | HHHHHTT--HHHHH | aaaaaalxxaaaaa |
1eyx_A_113 | 1eyx | A | 115 | 128 | EVYRTLNLPTSAYI | HHHHHTT--HHHHH | aaaaaavbpaaaaa |
1fec_A_433 | 1fec | A | 441 | 454 | AICLKMGAKISDFY | HHHHHTT-BHHHHH | aaaaaavpbaaaaa |
1fhj_A_76 | 1fhj | A | 86 | 99 | LHAYKLRVDPVNFK | HHHHTT---THHHH | aaaaaalxxaaaaa |
1fhj_B_86 | 1fhj | B | 91 | 104 | LHCDKLHVDPENFK | HHHHTS---THHHH | aaaaaalxxaaaaa |
1fs7_A_287 | 1fs7 | A | 287 | 299 | .IHGQKGVSCADCH | .HHHHTT--HHHHH | .aaaaavxxaaaaa |
1g08_A_81 | 1g08 | A | 86 | 99 | LHAHKLRVDPVNFK | HHHTTS---THHHH | aaaaaalxxaaaaa |
1g08_B_86 | 1g08 | B | 91 | 104 | LHCDKLHVDPENFK | HHTTTT---THHHH | aaaaaavxxaaaaa |
1g2y_A_14 | 1g2y | A | 14 | 27 | AALLESGLSKEALI | HHHHHTT--HHHHH | aaaaaagxxaaaaa |
1gu6_A_274 | 1gu6 | A | 274 | 286 | .IHGKNNVTCIDCH | .HHHHTT--HHHHH | .aaaaalxxaaaaa |
1gvh_A_75 | 1gvh | A | 83 | 96 | QKHTSFQIKPEQYN | HHHHHTT--HHHHH | aaaaaalxbaaaaa |
1hbr_A_81 | 1hbr | A | 86 | 99 | LHAYNLRVDPVNFK | HHHTTT---THHHH | aaaaaalxxaaaaa |
1hds_B_87 | 1hds | B | 90 | 103 | LHCNKLHVNPQNFR | HHHHTT---HHHHH | aaaaaavxxaaaaa |
1hg4_A_394 | 1hg4 | A | 395 | 408 | VKMKRLNLDRRELS | HHHHHHT--HHHHH | aaaaaavpbaaaaa |
1hlb_*_98 | 1hlb | - | 102 | 115 | RTHDLNKVGADHYN | HHHHHTT--HHHHH | aaaaaalxbaaaaa |
1i3d_A_86 | 1i3d | A | 91 | 104 | LHCDKLHVDPENFK | HHHTTT---HHHHH | aaaaaalxxaaaaa |
1icc_C_55 | 1icc | C | 56 | 69 | ESFEDVGHSPDARE | HHHHHHT--HHHHH | aaaaaavxxaaaaa |
1ird_A_81 | 1ird | A | 86 | 99 | LHAHKLRVDPVNFK | HHHHTS---THHHH | aaaaaalxpaaaaa |
1ird_B_281 | 1ird | B | 291 | 304 | LHCDKLHVDPENFR | HHHTTT---THHHH | aaaaaalxxwaaaa |
1iwh_A_81 | 1iwh | A | 86 | 99 | LHAHKLRVDPVNFK | HHHHTT---HHHHH | aaaaaalxxaaaaa |
1j09_A_253 | 1j09 | A | 254 | 267 | DWYKAEGFLPEALR | HHHHHTT--HHHHH | aaaaaavxxaaaaa |
1j37_A_286 | 1j37 | A | 287 | 300 | AEMEKQAYTPLKMF | HHHHHTT--HHHHH | aaaaaavxbaaaaa |
1jeb_A_81 | 1jeb | A | 86 | 99 | LHAYILRVDPVNFK | HHHHTS---THHHH | aaaaaalxxaaaaa |
1knc_A_131 | 1knc | A | 139 | 152 | HTLRTVGVDREAIF | HHHHHTT--HHHHH | aaaaaavxxaaaaa |
1kr7_A_62 | 1kr7 | A | 67 | 80 | SRHKGRNVGSAEFH | HHHHTTT--HHHHH | aaaaaalbbaaaaa |
1l2i_A_421 | 1l2i | A | 433 | 446 | SRFRMMNLQGEEFV | HHHHHHT--HHHHH | aaaaaalxxaaaaa |
1la6_B_86 | 1la6 | B | 91 | 104 | LHSEKLHVDPDNFK | HHHHTT---THHHH | aaaaaalxxaaaaa |
1ld8_A_131 | 1ld8 | A | 139 | 152 | VLLKSLQKDLHEEM | HHHHHTT--HHHHH | aaaaaalxxaaaaa |
1lht_*_83 | 1lht | - | 92 | 105 | SHATKHKIPVKYLE | HHHHTT---HHHHH | aaaaaavbpaaaaa |
1m3k_A_157 | 1m3k | A | 163 | 176 | NVAKQWQLSRDEQD | HHHHHTT--HHHHH | aaaaaalbxaaaaa |
1mo9_A_475 | 1mo9 | A | 482 | 495 | NVLIKQGLTVDELG | HHHHHTT-BHHHHH | aaaaaagpbaaaaa |
1mvc_A_354 | 1mvc | A | 355 | 368 | SKMRDMQMDKTELG | HHHHHTT--HHHHH | aaaaaalpxaaaaa |
1mwc_A_83 | 1mwc | A | 92 | 105 | SHATKHKIPVKYLE | HHHTTS---HHHHH | aaaaaalbxaaaaa |
1mwv_A_460 | 1mwv | A | 468 | 481 | AKVLASGLTVSQLV | HHHHHTT--HHHHH | aaaaaavpxaaaaa |
1myt_*_83 | 1myt | - | 92 | 105 | SHATKHKIPINNFK | HHHHTS---THHHH | aaaaaalxxaaaaa |
1n0u_A_160 | 1n0u | A | 162 | 175 | RALLELQVSKEDLY | HHHHTS---HHHHH | aaaaaalxxaaaaa |
1ney_A_96 | 1ney | A | 97 | 110 | ERRSYFHEDDKFIA | HHHHTT---HHHHH | aaaaaalxxaaaaa |
1nhp_*_400 | 1nhp | - | 405 | 418 | SLAIQAKMTIEDLA | HHHHHTT-BHHHHH | aaaaaavxbaaaaa |
1nk4_A_669 | 1nk4 | A | 672 | 685 | MEAFRRDLDIHTKT | HHHHHTT--HHHHH | aaaaaalxxaaaaa |
1np7_A_355 | 1np7 | A | 364 | 377 | FLCKNLGIDWRWGA | HHHHTT-B-HHHHH | aaaaaavxpaaaaa |
1nv8_A_60 | 1nv8 | A | 70 | 83 | VEKRASGYPLHYIL | HHHHHTT--HHHHH | aaaaaagpxaaaaa |
1o8a_A_301 | 1o8a | A | 303 | 316 | EAMLKQGWTPRRMF | HHHHHTT--HHHHH | aaaaaalxbaaaaa |
1oj6_A_86 | 1oj6 | A | 94 | 107 | RKHRAVGVKLSSFS | HHHHHTT--TTHHH | aaaaaagxxaaaaa |
1or4_A_110 | 1or4 | A | 121 | 134 | SIHLRIGLLPKWYM | HHHHHTT--HHHHH | aaaaaavxxaaaaa |
1out_A_82 | 1out | A | 87 | 100 | LHAFKLRVDPGNFK | HHHHTT---THHHH | aaaaaalxpaaaaa |
1out_B_86 | 1out | B | 91 | 104 | THANKLFVDPDNFR | HHHHTT---THHHH | aaaaaalxxaaaaa |
1owl_A_349 | 1owl | A | 358 | 371 | FLTKDLIIDWRRGE | HHHHTS---THHHH | aaaaaalbpaaaaa |
1p8c_A_60 | 1p8c | A | 68 | 81 | VRCVQEGASDEEIF | HHHHTTS--HHHHH | aaaaaagpbaaaaa |
1p8c_F_60 | 1p8c | F | 68 | 81 | VRCVQEGASDEEIF | HHHHHTT--HHHHH | aaaaaavxbaaaaa |
1pk5_A_441 | 1pk5 | A | 455 | 468 | VRLRSLQFDQREFV | HHHHHTT--HHHHH | aaaaaavpbaaaaa |
1qkn_A_329 | 1qkn | A | 340 | 353 | SRFRELKLQHKEYL | HHHHHTT--HHHHH | aaaaaavpxaaaaa |
1qpw_A_76 | 1qpw | A | 86 | 99 | LHAHKLRVDPVNFK | HHTTTT---HHHHH | aaaaaalxxaaaaa |
1qpw_B_81 | 1qpw | B | 91 | 104 | LHCDQLHVDPENFR | HHHHTT---THHHH | aaaaaavxxaaaaa |
1r2r_A_96 | 1r2r | A | 97 | 110 | ERRHVFGESDELIG | HHHHTS---HHHHH | aaaaaavxxaaaaa |
1r5q_A_33 | 1r5q | A | 41 | 54 | NAVFCANIPVPEII | HHHHHTT--HHHHH | aaaaaalxxaaaaa |
1reo_A_185 | 1reo | A | 188 | 201 | YLLKEGNLSPGAVD | HHHHTS---HHHHH | aaaaaavxxaaaaa |
1spg_A_78 | 1spg | A | 88 | 101 | LHAFKLRVDPANFK | HHHTTS---THHHH | aaaaaalxxaaaaa |
1spg_B_86 | 1spg | B | 91 | 104 | KHSEKIHVDPDNFR | HHHHTT---THHHH | aaaaaavxpaaaaa |
1uok_*_386 | 1uok | - | 394 | 407 | EKVMERGEDIEKVM | HHHHTS---HHHHH | aaaaaavxxaaaaa |
1v75_A_76 | 1v75 | A | 86 | 99 | LHAYNLRVDPVNFK | HHHHTS---HHHHH | aaaaaalxxaaaaa |
1v75_B_81 | 1v75 | B | 91 | 104 | LHCEKLHVDPENFK | HHHTTT---THHHH | aaaaaalxxaaaaa |
3grs_*_440 | 3grs | - | 448 | 461 | AVAVKMGATKADFD | HHHHHTT-BHHHHH | aaaaaavxbaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gu6_A_274 | 1gu6 | A | HA5HEC BINDING SITE FOR CHAIN A | I - 274 |
1gu6_A_274 | 1gu6 | A | HA4HEC BINDING SITE FOR CHAIN A | H - 275 |
1gu6_A_274 | 1gu6 | A | HA4HEC BINDING SITE FOR CHAIN A | T - 281 |
1gu6_A_274 | 1gu6 | A | HA4HEC BINDING SITE FOR CHAIN A | C - 282 |
1gu6_A_274 | 1gu6 | A | HA4HEC BINDING SITE FOR CHAIN A | C - 285 |
1gu6_A_274 | 1gu6 | A | HA4HEC BINDING SITE FOR CHAIN A | H - 286 |
1gvh_A_75 | 1gvh | A | AC2HEM BINDING SITE FOR CHAIN A | I - 81 |
1gvh_A_75 | 1gvh | A | AC2HEM BINDING SITE FOR CHAIN A | K - 84 |
1oj6_A_86 | 1oj6 | A | AC1HEM BINDING SITE FOR CHAIN A | L - 92 |
1oj6_A_86 | 1oj6 | A | AC1HEM BINDING SITE FOR CHAIN A | H - 96 |
1oj6_A_86 | 1oj6 | A | AC1HEM BINDING SITE FOR CHAIN A | F - 106 |
Clusters included in this Subclass |
CLUSTER: HH.3.20 |
CLUSTER: HH.4.30 |
CLUSTER: HH.4.94 |
CLUSTER: HH.5.165 |
CLUSTER: HH.5.242 |
CLUSTER: HH.5.3 |
CLUSTER: HH.6.197 |
CLUSTER: HH.6.4 |
CLUSTER: HH.6.69 |
CLUSTER: HH.7.1 |