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Information on SUBCLASS 2.3.2
Subclass Accession number: 519
Subclass: 2.3.2 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 65

Average sequence ID (%) : 15.3 +/- 16.8
Average RMSD (Å) : 0.328 +/- 0.134

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: XXcXXX
(φψ)-conformation: bbeabb
Pattern: xxx[ADEGKNQR][dehknpqrst]xx
Conservation:-0.567-0.327-0.4132.2260.015-0.407-0.527
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a8d_*_1251a8d   -131137SLKGNNLEEETTEEbbbeabb
1auk_*_1811auk   -181187LLANLSVEEETTEExbbeabx
1cb0_A_451cb0   A4854GKIKNVDEEETTEEbbbeaxx
1cdy_*_351cdy   -3844GNQGSFLEEETTEEbbbeabx
1chd_*_2331chd   -237243ARSGANYEEETTEEbbbeabx
1crb_*_811crb   -8793SWDGDKLEEETTEEbxbeabb
1dar_*_6311dar   -635641EPRGNAQEEETTEEebbeabb
1dj0_A_1751dj0   A184190TRHGPYVEEETTEEbxbeaxb
1eov_A_1251eov   A130136LRQQASLEEETTEExbbeabb
1f1s_A_9551f1s   A960966QKVGNDYEEETTEEbxbeabb
1f42_A_1521f42   A157163RVRGDNKEEETTEEbbbeaxb
1fp2_A_3351fp2   A340346PLTGFLSEEETTEExabeabb
1g0u_H_201g0u   H2026STQGPIVEEETTEEbbxewbx
1g0u_I_341g0u   I3541FHYGHVFEESSSEEbbbeabb
1gkz_A_1871gkz   A187192.FVGIIC.EETTEE.bbeaxx
1h3q_A_591h3q   A6571DKFNEWFEEETTEEbbbeaxx
1hn0_A_9931hn0   A9951001QVSGDNTEEETTEEbxbeabb
1i9z_A_6801i9z   A686692FDYEDTGEEETTEEbbbeabx
1iqq_A_1521iqq   A156162QKKGTTTEEETTEEbbbeabb
1j31_A_821j31   A8995EKSGNYLEEETTEEbxbeabb
1jgt_A_1191jgt   A125131VRTGDRVEEETTEEbbbeabb
1jmx_A_2371jmx   A242248VKVGDANEEETTEEbxbeabx
1jvn_A_1671jvn   A171177AKYGSEEEEETTEEbbbeaxx
1k8k_C_761k8k   C8086TLKGRTWEEETTEEbxbeabx
1k9j_A_3681k9j   A370376EFSGSGWEEETTEEbxbeabb
1kjq_A_2621kjq   A269275FVCGDEVEEETTEEbbbeaxb
1kk1_A_3891kk1   A394400RQIGSRWEEETTEEbxbeabx
1knw_A_2781knw   A288294KQMGSRHEEETTEEbxbeabb
1knx_A_1731knx   A183189YRLGNRLEEETTEEbxbeabb
1l2t_A_21l2t   A1117YKMGEEIEEETTEEbbbeaxb
1lf7_A_531lf7   A5864APQGTAMEEETTEEbwbeabb
1ln1_A_851ln1   A9197QECNGETEEETTEEbxbeaxx
1lvl_*_2821lvl   -282287.MNGAAI.EETTEE.bbeabx
1m4v_A_1101m4v   A115121KEVDAGVEEETTEEbxbeabb
1mju_H_881mju   H94100NKLGWFPEEETTEEbbbeabx
1mkm_A_961mkm   A100106LKDGFEGEE-SSEExxbeabb
1mop_A_2651mop   A272278ARLGTTREEETTEEbbbeaxx
1mug_A_1241mug   A128134LTIGSTQEEETTEExbbeaxx
1nr0_A_4711nr0   A476482KLSGASVEEETTEExbbeabb
1o6v_A_4681o6v   A477483VTIGKGTEEETTEEbbbeaxb
1oaq_L_641oaq   L6773SLIGNKAEEETTEEbbbeabx
1olr_A_1461olr   A153159GYNGNMREEETTEEbbbeaxx
1oxd_A_1051oxd   A113119KFEGDTLEEETTEEbxbeaxx
1pl3_A_701pl3   A7480WANGNQIEEETTEEbxbeabx
1pn2_A_891pn2   A101107TPKGTNVEEETTEEbxbeabb
1q0e_A_151q0e   A2127EAKGDTVEEETTEEbxbeabb
1q0r_A_31q0r   A612VPSGDVEEEETTEEbwbeabb
1q2w_A_171q2w   A2026VTCGTTTEEETTEEbbbeaxb
1qd6_C_1541qd6   C164170AENGNWLEEETTEEbbbeaxb
1qhv_A_4791qhv   A480486FRNGNSTEEETTEExxbeabb
1qj8_A_1211qj8   A130136SRIRSVDEEETTEEbbbeaxb
1r17_A_4031r17   A409415YKTALSSEEETTEEbbbeabb
1r2q_A_551r2q   A6268VCLDDTTEEETTEEbxbeabx
1ryb_A_461ryb   A5157GSIGEVPEEETTEEbbbeaxw
1rz0_A_1081rz0   A118124VQAGDHTEEETTEEbxbeabb
1sgv_A_1491sgv   A159165RRRDQLIEEETTEEbxbeabb
1sjw_A_641sjw   A7177EERGPWVEEETTEEbbbeaxb
1tig_*_1481tig   -155161KMDGRNMEEETTEEbxbeabb
1ucr_A_521ucr   A5561WSSGSTTEEETTEEbxbeabb
1uct_A_371uct   A4248IIKNSTYEEETTEEbbbeabb
1usp_A_781usp   A8692QKAGLAFEEETTEEbxbeaxb
1usr_A_4241usr   A430436TVSNKTAEEETTEEbbbeabb
1v8c_A_431v8c   A4349LFEGEGLHEETTEEabbeaxx
2hft_*_1312hft   -134140VRRNNTFEEETTEExbbeabb
2sli_*_4672sli   -474480NFSGNNLEEETTEEbxbeaxx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1auk_*_1811auk   *     NAGN-ACETYL-D-GLUCOSAMINE L - 182
1auk_*_1811auk   *     NAGN-ACETYL-D-GLUCOSAMINE A - 183
1auk_*_1811auk   *     NAGN-ACETYL-D-GLUCOSAMINE N - 184
1crb_*_811crb   *     CDCADMIUM ION G - 90
1crb_*_811crb   *     CDCADMIUM ION D - 91
1crb_*_811crb   *     RTLRETINOL Q - 97
1g0u_H_201g0u   H     MGMAGNESIUM ION Q - 22
1j31_A_821j31   A     MSESELENOMETHIONINE I - 83
1j31_A_821j31   A     MSESELENOMETHIONINE A - 99
1j31_A_821j31   A     MSESELENOMETHIONINE V - 102
1j31_A_821j31   A     MSESELENOMETHIONINE G - 103
1k9j_A_3681k9j   A     CACALCIUM ION C - 368
1k9j_A_3681k9j   A     MANALPHA-D-MANNOSE E - 370
1k9j_A_3681k9j   A     NAGN-ACETYL-D-GLUCOSAMINE F - 371
1k9j_A_3681k9j   A     NAGN-ACETYL-D-GLUCOSAMINE S - 372
1k9j_A_3681k9j   A     MANALPHA-D-MANNOSE S - 372
1k9j_A_3681k9j   A     NAGN-ACETYL-D-GLUCOSAMINE G - 373
1k9j_A_3681k9j   A     MANALPHA-D-MANNOSE G - 373
1k9j_A_3681k9j   A     NAGN-ACETYL-D-GLUCOSAMINE S - 374
1k9j_A_3681k9j   A     MANALPHA-D-MANNOSE S - 374
1k9j_A_3681k9j   A     MANALPHA-D-MANNOSE G - 375
1k9j_A_3681k9j   A     MANALPHA-D-MANNOSE N - 377
1k9j_A_3681k9j   A     CACALCIUM ION N - 377
1k9j_A_3681k9j   A     MANALPHA-D-MANNOSE D - 378
1k9j_A_3681k9j   A     CACALCIUM ION D - 378
1k9j_A_3681k9j   A     MANALPHA-D-MANNOSE N - 379
1k9j_A_3681k9j   A     CACALCIUM ION N - 379
1kjq_A_2621kjq   A     MGMAGNESIUM ION E - 267
1kjq_A_2621kjq   A     ADPADENOSINE-5'-DIPHOSPHATE E - 267
1kjq_A_2621kjq   A     ADPADENOSINE-5'-DIPHOSPHATE F - 269
1kjq_A_2621kjq   A     EDO1,2-ETHANEDIOL D - 273
1kjq_A_2621kjq   A     EDO1,2-ETHANEDIOL E - 274
1kjq_A_2621kjq   A     EDO1,2-ETHANEDIOL V - 275
1kjq_A_2621kjq   A     EDO1,2-ETHANEDIOL I - 276
1kjq_A_2621kjq   A     MGMAGNESIUM ION S - 278
1kjq_A_2621kjq   A     ADPADENOSINE-5'-DIPHOSPHATE S - 278
1kjq_A_2621kjq   A     MGMAGNESIUM ION E - 279
1kjq_A_2621kjq   A     ADPADENOSINE-5'-DIPHOSPHATE E - 279
1l2t_A_21l2t   A     ATPADENOSINE-5'-TRIPHOSPHATE Y - 11
1l2t_A_21l2t   A     ATPADENOSINE-5'-TRIPHOSPHATE K - 12
1l2t_A_21l2t   A     ATPADENOSINE-5'-TRIPHOSPHATE M - 13
1l2t_A_21l2t   A     ATPADENOSINE-5'-TRIPHOSPHATE I - 18
1l2t_A_21l2t   A     ATPADENOSINE-5'-TRIPHOSPHATE Y - 19
1l2t_A_21l2t   A     ATPADENOSINE-5'-TRIPHOSPHATE A - 20
1lf7_A_531lf7   A     CITCITRIC ACID T - 53
1lf7_A_531lf7   A     CITCITRIC ACID T - 68
1lf7_A_531lf7   A     CITCITRIC ACID R - 70
1ln1_A_851ln1   A     DLP1,2-DILINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE W - 101
1ln1_A_851ln1   A     DLP1,2-DILINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE V - 103
1mju_H_881mju   H     GOLGLYCEROL K - 95
1mju_H_881mju   H     GOLGLYCEROL L - 96
1mju_H_881mju   H     GOLGLYCEROL G - 97
1mju_H_881mju   H     GOLGLYCEROL W - 98
1mkm_A_961mkm   A     ZNZINC ION Y - 108
1mop_A_2651mop   A     GOLGLYCEROL T - 276
1mop_A_2651mop   A     GOLGLYCEROL T - 277
1mop_A_2651mop   A     GOLGLYCEROL R - 278
1oxd_A_1051oxd   A     NYC(5Z)-5-(1H-INDOL-3-YLMETHYLENE)-4H-IMIDAZOL-4-ONE A - 110
1oxd_A_1051oxd   A     NYC(5Z)-5-(1H-INDOL-3-YLMETHYLENE)-4H-IMIDAZOL-4-ONE V - 112
1oxd_A_1051oxd   A     NYC(5Z)-5-(1H-INDOL-3-YLMETHYLENE)-4H-IMIDAZOL-4-ONE N - 121
1pl3_A_701pl3   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 70
1pl3_A_701pl3   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 71
1pl3_A_701pl3   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 72
1qd6_C_1541qd6   C     CACALCIUM ION S - 154
1qd6_C_1541qd6   C     HDS1-HEXADECANOSULFONIC ACID S - 154
1qhv_A_4791qhv   A     SULSULFATE ANION R - 481
1qhv_A_4791qhv   A     SULSULFATE ANION N - 482
1qhv_A_4791qhv   A     SULSULFATE ANION G - 483
1qhv_A_4791qhv   A     SULSULFATE ANION N - 484
1qj8_A_1211qj8   A     PCLPLATINUM(II) DI-CHLORIDE V - 121
1r2q_A_551r2q   A     MGMAGNESIUM ION D - 75
1r2q_A_551r2q   A     GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER D - 75
1r2q_A_551r2q   A     MGMAGNESIUM ION T - 76
1r2q_A_551r2q   A     GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER T - 76
1rz0_A_1081rz0   A     MSESELENOMETHIONINE I - 110
1rz0_A_1081rz0   A     FADFLAVIN-ADENINE DINUCLEOTIDE H - 123
1rz0_A_1081rz0   A     MSESELENOMETHIONINE L - 125
1rz0_A_1081rz0   A     MSESELENOMETHIONINE F - 126
1rz0_A_1081rz0   A     MSESELENOMETHIONINE V - 130
1rz0_A_1081rz0   A     MSESELENOMETHIONINE T - 131
1rz0_A_1081rz0   A     MSESELENOMETHIONINE D - 132
1rz0_A_1081rz0   A     MSESELENOMETHIONINE I - 133
1rz0_A_1081rz0   A     MSESELENOMETHIONINE I - 135
1sjw_A_641sjw   A     NGVMETHYL 5,7-DIHYDROXY-2-METHYL-4,6,11-TRIOXO-3,4,6,11-TETRAHYDROTETRACENE-1-CARBOXYLATE L - 65
1sjw_A_641sjw   A     NGVMETHYL 5,7-DIHYDROXY-2-METHYL-4,6,11-TRIOXO-3,4,6,11-TETRAHYDROTETRACENE-1-CARBOXYLATE L - 83
1usp_A_781usp   A     MSESELENOMETHIONINE I - 79
1usp_A_781usp   A     MSESELENOMETHIONINE L - 85
1usp_A_781usp   A     GOLGLYCEROL K - 87
1usp_A_781usp   A     GOLGLYCEROL F - 92
1usp_A_781usp   A     MSESELENOMETHIONINE L - 98
1usp_A_781usp   A     MSESELENOMETHIONINE E - 99
1usp_A_781usp   A     MSESELENOMETHIONINE G - 100
1usp_A_781usp   A     MSESELENOMETHIONINE H - 101

Clusters included in this Subclass
CLUSTER: HA.1.101
CLUSTER: HA.1.12
CLUSTER: HA.1.48
CLUSTER: HA.1.69
CLUSTER: HA.2.12
CLUSTER: HA.2.122
CLUSTER: HA.2.31
CLUSTER: HA.2.52
CLUSTER: HA.3.102
CLUSTER: HA.3.14
CLUSTER: HA.3.53