Information on SUBCLASS 3.4.2 |
Subclass Accession number: 5488
Subclass: 3.4.2 ![]() Type: HE alpha-beta DB: ArchDB95 Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() |
Number of loops: 39 Average sequence ID (%) : 13.0 +/- 14.5 Average RMSD (Å) : 0.631 +/- 0.273 Consensus geometry
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Consensus Sequence: | XXXXphX |
(φψ)-conformation: | aabaabb |
Pattern: | x | [fhilmvw] | x | x | x | x | [knprst] | [dehknqrst] | [acfgiltv] | [dehknprst] | [afgilmptv] | x |
Conservation: | -1.551 | 1.008 | -0.443 | -0.209 | -0.350 | -0.932 | 2.161 | 1.113 | -0.181 | -0.615 | 0.117 | -0.116 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a4y_A_440 | 1a4y | A | 448 | 459 | ALEKDKPSLRVI | HHHHH-TT-EEE | aaaaabaabxbx |
1b3t_A_514 | 1b3t | A | 523 | 533 | GTALAIPQCRL. | HHHHH-TT-EE. | aaaaabaabbb. |
1b63_A_164 | 1b63 | A | 177 | 188 | RIALARFDVTIN | HHHHH-TT-EEE | aaaaabaabxbb |
1b74_A_12 | 1b74 | A | 18 | 29 | AIRNRYRKVDIV | HHHHHSSS-EEE | aaaaabaapxbb |
1cjc_A_16 | 1cjc | A | 24 | 35 | HLLKHHSRAHVD | HHHHH-SS-EEE | aaaaabaapbbb |
1cza_N_871 | 1cza | N | 878 | 889 | TVKELSPKCNVS | HHHHHSTTEEEE | aaaaabaabbbb |
1d2k_A_107 | 1d2k | A | 114 | 125 | LLKKNNRNLKTL | HHHHH-TT-EEE | aaaaabaaxbbb |
1e8c_A_243 | 1e8c | A | 247 | 258 | RWLAKLPDAVAV | HHHTT-TT-EEE | aaaaabaaxbxb |
1ek6_A_156 | 1ek6 | A | 170 | 181 | DLCQADKTWNAV | HHHHH-TT-EEE | aaaaabaaxbbb |
1euc_A_109 | 1euc | A | 117 | 128 | HRLLRQGKTRLI | HHHTT-SS-EEE | aaaaabaabxbb |
1f9m_A_47 | 1f9m | A | 58 | 69 | KLAEEYLDVIFL | HHHHH-TTSEEE | aaaaabaabxbb |
1gh2_A_35 | 1gh2 | A | 46 | 57 | SMSNKYPQAVFL | HHHHH-TTSEEE | aaaaabaabbbb |
1gpe_A_34 | 1gpe | A | 41 | 52 | AKLTENPKIKVL | HHHHTSTT--EE | aaaaaxaaxxbb |
1gpu_A_504 | 1gpu | A | 512 | 523 | KNSLESKHTPSI | HHHHH-SS--EE | aaaaaxaabwbb |
1h7w_A_618 | 1h7w | A | 627 | 638 | ELKADFPDNIVI | HHHHH-TTSEEE | aaaaabaaxxbb |
1i6a_A_102 | 1i6a | A | 112 | 123 | MLHQTFPKLEMY | HHHHH-TTEEEE | aaaaabaaxbxb |
1itz_A_509 | 1itz | A | 517 | 528 | KVAVLNRKRPSI | HHHHH-TTS-EE | aaaaaxaabxbb |
1ixc_A_105 | 1ixc | A | 112 | 123 | AFLTSTPTATVS | HHHHH-TTEEEE | aaaaabaaxbbb |
1k4k_A_53 | 1k4k | A | 62 | 72 | LAIADKPLFTL. | HHHTT-TTEEE. | aaaaabaabbb. |
1lam_*_180 | 1lam | - | 190 | 201 | NLKSASIKTDVF | HHHHH-SSEEEE | aaaaabaabbbb |
1lu4_A_1037 | 1lu4 | A | 1048 | 1059 | QVAAANPAVTFV | HHHHH-TTSEEE | aaaaabaabxxb |
1mu2_A_156 | 1mu2 | A | 170 | 181 | PFRKANKDVIII | HHHHH-TTSEEE | aaaaabaaxxbb |
1ne9_A_31 | 1ne9 | A | 31 | 42 | GWAKVKNNWEPV | HHHHHTTTSEEE | aaaaaxaabxwb |
1ny5_A_59 | 1ny5 | A | 65 | 76 | WIKERSPETEVI | HHHHH-TTSEEE | aaaaabaaxxbb |
1oc2_A_15 | 1oc2 | A | 23 | 34 | YVYNNHPDVHVT | HHHHH-TT-EEE | aaaaabaaxxbb |
1px0_A_38 | 1px0 | A | 43 | 53 | AFAETYPQLKP. | HHHHH-TTSEE. | aaaaabaabbx. |
1qtr_A_273 | 1qtr | A | 278 | 289 | DLAKAWPEAELH | HHHHH-TTSEEE | aaaaabaaxxxb |
1qzz_A_195 | 1qzz | A | 199 | 210 | AIALRAPHLRGT | HHHHH-TT-EEE | aaaaabaaxbbb |
1r26_A_37 | 1r26 | A | 42 | 53 | KIAYEFPTVKFA | HHHHH-TTSEEE | aaaaabaabxbb |
1rjd_A_112 | 1rjd | A | 114 | 125 | PLLQMFPHLAYV | HHHHH-TTEEEE | aaaaabaaxbbb |
1s4q_A_34 | 1s4q | A | 40 | 50 | CLRERIPNLHF. | HHHHHSTT-EE. | aaaaabaaxxx. |
1thg_*_429 | 1thg | - | 434 | 445 | VMLSATKDVNRW | HHHHH-TTS-EE | aaaaaxaabxbb |
1udb_*_148 | 1udb | - | 162 | 173 | DLQKAQPDWSIA | HHHHHSTT-EEE | aaaaabaaxbbx |
1v6s_A_71 | 1v6s | A | 76 | 86 | ALRAHLPEARF. | HHHHH-TTEEE. | aaaaabaaxbb. |
1vrt_A_156 | 1vrt | A | 170 | 181 | PFRKQNPDIVIY | HHHHH-TT-EEE | aaaaabaaxbbb |
1xaa_*_190 | 1xaa | - | 201 | 212 | EVGRGYPDVALE | HHHTT-TTSEEE | aaaaabaabxbb |
1zpd_A_515 | 1zpd | A | 523 | 534 | KVALANTDGPTL | HHHHH--SS-EE | aaaaaxaabxbx |
2bce_*_394 | 2bce | - | 403 | 414 | QHKSHAKSANTY | HHHHH-SS--EE | aaaaapaabxbb |
2bnh_*_436 | 2bnh | - | 444 | 455 | ALEGSKPGLRVI | HHHHH-SS-EEE | aaaaabaabbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1oc2_A_15 | 1oc2 | A | AC4NAH BINDING SITE FOR CHAIN A | F - 15 |
1oc2_A_15 | 1oc2 | A | AC4NAH BINDING SITE FOR CHAIN A | I - 16 |
1oc2_A_15 | 1oc2 | A | AC4NAH BINDING SITE FOR CHAIN A | D - 37 |
Clusters included in this Subclass |
CLUSTER: HE.2.85 |
CLUSTER: HE.3.24 |
CLUSTER: HE.4.25 |
CLUSTER: HE.5.11 |