Information on SUBCLASS 4.3.2 |
Subclass Accession number: 3887
Subclass: 4.3.2 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 23 Average sequence ID (%) : 9.6 +/- 14.3 Average RMSD (Å) : 0.670 +/- 0.199 Consensus geometry
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Consensus Sequence: | hXXXpXhX |
(φψ)-conformation: | bbpabpbb |
Pattern: | x | [afgilpvy] | x | x | [adenpqst] | [ehknqrsty] | x | x | x |
Conservation: | -1.000 | -0.768 | -0.825 | 0.246 | 1.088 | 1.412 | -0.796 | 0.768 | -1.126 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bco_*_265 | 1bco | - | 270 | 278 | GYLHNVFVR | EEE-SB-EE | bbxxabxbx |
1bd0_A_269 | 1bd0 | A | 269 | 276 | .YTAQTEEW | .EE--SSEE | .bbxabpbx |
1dlc_*_605 | 1dlc | - | 606 | 614 | LASFSTPFE | EEE-SS-EE | bbxxaxwbb |
1dun_*_19 | 1dun | - | 20 | 28 | DLCVPYDIM | EEE-SS-EE | xbbxabxbb |
1f7d_A_18 | 1f7d | A | 19 | 27 | DLLAAKEIH | EEE-SS-EE | xbbxabxbb |
1gc5_A_198 | 1gc5 | A | 198 | 205 | .VQAPRENR | .EE-SS-EE | .xbxabxbb |
1ig8_A_151 | 1ig8 | A | 154 | 162 | GFTFSFPAS | EEE--SSEE | bbxbabxbb |
1jj2_H_44 | 1jj2 | H | 47 | 55 | ELVVEKPVQ | EEEE-S-EE | bxbxabxbb |
1lml_*_101 | 1lml | - | 101 | 108 | .VRDVNWGA | .EE-SS-EE | .bbxaxxbx |
1lns_A_601 | 1lns | A | 604 | 612 | DLELPSMLT | EEE-SS-EE | xxxxabxbb |
1lwd_A_5 | 1lwd | A | 5 | 12 | .IKVAKPVV | .EE-SS-EE | .xxbabxbx |
1ml9_A_44 | 1ml9 | A | 44 | 51 | .RFIDHSII | .EE-SS-EE | .bxbabxxb |
1mwp_A_82 | 1mwp | A | 85 | 93 | VVEANQPVT | EEE-SS-EE | bbxxabxbx |
1nr6_A_365 | 1nr6 | A | 365 | 372 | .HAVTRDVR | .EE-SS-EE | .bbxabpbb |
1p42_A_130 | 1p42 | A | 130 | 137 | .FVVEEPII | .EE--S-EE | .xbxabwbb |
1po5_A_369 | 1po5 | A | 369 | 376 | .HTVTKDTQ | .EE-SS-EE | .bbxabpbx |
1q5h_A_24 | 1q5h | A | 26 | 34 | DLYSAYDYT | EEE-SS-EE | xbbxabxbb |
1qs1_A_181 | 1qs1 | A | 181 | 189 | DIKFDSYLD | EE--SS-EE | bbxxabpxb |
1six_A_27 | 1six | A | 28 | 36 | DLYSAEDVE | EEE-SS-EE | xxxxabxbb |
1ua4_A_190 | 1ua4 | A | 190 | 197 | .FEAPRENR | .EE-SS-EE | .xbxabxbb |
1uyr_A_1887 | 1uyr | A | 1892 | 1900 | IGVETRTVE | EEE--S-EE | bbbxaxxxb |
2sli_*_500 | 2sli | - | 500 | 508 | FKAFPTNYL | EEE-SS-EE | bbxxabxbb |
3rp2_A_148 | 3rp2 | A | 148 | 156 | DPTSYTLRE | EEE-SB-EE | bwxxabpbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gc5_A_198 | 1gc5 | A | ADPADENOSINE-5'-DIPHOSPHATE | R - 205 |
1nr6_A_365 | 1nr6 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | H - 365 |
1po5_A_369 | 1po5 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | H - 369 |
1q5h_A_24 | 1q5h | A | DUDDEOXYURIDINE-5'-DIPHOSPHATE | D - 26 |
1six_A_27 | 1six | A | MGMAGNESIUM ION | D - 28 |
1six_A_27 | 1six | A | DUP2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE | D - 28 |
1ua4_A_190 | 1ua4 | A | AMPADENOSINE MONOPHOSPHATE | R - 194 |
1ua4_A_190 | 1ua4 | A | AMPADENOSINE MONOPHOSPHATE | E - 195 |
1ua4_A_190 | 1ua4 | A | AMPADENOSINE MONOPHOSPHATE | N - 196 |
1ua4_A_190 | 1ua4 | A | GLCGLUCOSE | R - 197 |
1ua4_A_190 | 1ua4 | A | AMPADENOSINE MONOPHOSPHATE | R - 197 |
1ua4_A_190 | 1ua4 | A | GLCGLUCOSE | I - 199 |
1ua4_A_190 | 1ua4 | A | GLCGLUCOSE | S - 201 |
Clusters included in this Subclass |
CLUSTER: AR.3.196 |
CLUSTER: AR.4.58 |
CLUSTER: AR.5.14 |
CLUSTER: AR.5.198 |