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PDB code:

Information on SUBCLASS 2.2.1

Subclass Accession number: 1074 Subclass: 2.2.1 Type: EH beta-alpha DB: ArchDB40 Image coordinates: Consensus coordinates:

Number of loops: 33 Average sequence ID (%) : 9.4 +/- 13.6 Average RMSD (Å) : 0.730 +/- 0.201 Consensus geometry d (Å): 11 delta (°): 0-45 theta (°): 45-90 rho (°): 270-315

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1aor_A_159	1aor	A	161	168	ASIGPAGE	EE--HHHH	bbbbaaaa
1aq0_A_165	1aq0	A	167	174	ANIYPYLA	EE--HHHH	bxbbaaaa
1bfd_*_92	1bfd	-	97	104	GQQTRAMI	EE--HHHH	xbxxaaaa
1c1d_A_280	1c1d	A	280	287	LYAPDFVA	EE--HHHH	xbxpaaaa
1e4m_M_93	1e4m	M	96	103	FSIAWSRI	EE--HHHH	bbxxaaaa
1edt_*_56	1edt	-	59	66	LHFNENVQ	EE--HHHH	xbbxaaaa
1f7d_A_48	1f7d	A	52	59	IIGKSSIG	EE--HHHH	xbxxaaaa
1g31_A_77	1g31	A	78	85	NVPHPFVA	EE--HHHH	xbppaaaa
1glq_A_29	1glq	A	31	38	EVVTIDTW	EE--HHHH	bxbxaaaa
1goi_A_6	1goi	A	11	18	YFIPTNQI	EE--HHHH	bbbxaaaa
1ihu_A_380	1ihu	A	383	390	SRIDPHEE	EE--HHHH	bbbxaaaa
1ihu_A_71	1ihu	A	74	81	LEIDPQAA	EE--HHHH	bbbxaaaa
1iug_A_136	1iug	A	136	143	ALADLPAL	EE--HHHH	xbxxaaaa
1ixh_*_294	1ixh	-	294	301	ASLPDSVV	EE--HHHH	xxxwaaaa
1jys_A_119	1jys	A	119	126	FKADDKLI	EE--HHHH	bxxxaaaa
1kol_A_36	1kol	A	43	50	TNICGSDQ	EE--HHHH	bxbbaaaa
1kpg_A_166	1kpg	A	170	177	TGLHPKEI	EE--HHHH	bbxxaaaa
1kwg_A_400	1kwg	A	402	409	LVFDYEAA	EE--HHHH	bxbbaaaa
1nu4_A_40	1nu4	A	43	50	ILVSRSLK	EE--HHHH	bbbxaaaa
1o6a_A_134	1o6a	A	141	148	EIVSPKER	EE--HHHH	bbxxaaaa
1okg_A_222	1okg	A	222	229	VLRSEEEI	EE--HHHH	bxxxaaaa
1omh_A_81	1omh	A	88	95	FSAPKSVS	EE--HHHH	xbxxaaaa
1p2z_A_538	1p2z	A	538	545	RWSLDYMD	EE--HHHH	bbxxaaaa
1p4x_A_216	1p4x	A	218	225	IHMDDAQQ	EE--HHHH	bbbxaaaa
1pkl_A_437	1pkl	A	440	447	VFFDADKL	EE--HHHH	bxbxaaaa
1q1g_A_128	1q1g	A	128	135	AVGDFDVY	EE--HHHH	xbxxaaaa
1q7h_A_56	1q7h	A	56	63	LIPSVYLL	EE--HHHH	xbxxaaaa
1qvb_A_76	1qvb	A	79	86	VGVEWSRI	EE--HHHH	bbbxaaaa
1rxy_A_130	1rxy	A	130	137	AVADFECT	EE--HHHH	xbxxaaaa
1sox_A_116	1sox	A	117	124	AEPPAELL	EE--HHHH	bbxpaaaa
1ub0_A_46	1ub0	A	51	58	HLLPPEVV	EE--HHHH	bxxxaaaa
1ufa_A_203	1ufa	A	204	211	VRPGVDEL	EE--HHHH	xbwxaaaa
1ug6_A_73	1ug6	A	76	83	FSVAWPRI	EE--HHHH	bbxxaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1e4m_M_93	1e4m	M	GOLGLYCEROL	R - 95
1glq_A_29	1glq	A	GTBS-(P-NITROBENZYL)GLUTATHIONE	I - 35
1glq_A_29	1glq	A	GTBS-(P-NITROBENZYL)GLUTATHIONE	W - 38
1goi_A_6	1goi	A	GOLGLYCEROL	Y - 10
1ihu_A_380	1ihu	A	CDCADMIUM ION	D - 386
1ihu_A_380	1ihu	A	CDCADMIUM ION	P - 387
1ihu_A_380	1ihu	A	CDCADMIUM ION	H - 388
1ihu_A_380	1ihu	A	CDCADMIUM ION	E - 389
1ihu_A_380	1ihu	A	CDCADMIUM ION	H - 397
1ihu_A_380	1ihu	A	CDCADMIUM ION	T - 401
1kol_A_36	1kol	A	NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE	I - 45
1kol_A_36	1kol	A	ZNZINC ION	C - 46
1kol_A_36	1kol	A	NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE	C - 46
1kol_A_36	1kol	A	ZNZINC ION	G - 47
1kol_A_36	1kol	A	NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE	G - 47
1kol_A_36	1kol	A	ZNZINC ION	S - 48
1kol_A_36	1kol	A	NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE	S - 48
1kol_A_36	1kol	A	ZNZINC ION	D - 49
1kol_A_36	1kol	A	NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE	D - 49
1kol_A_36	1kol	A	NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE	Q - 50
1kol_A_36	1kol	A	NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE	H - 51
1kpg_A_166	1kpg	A	MSESELENOMETHIONINE	L - 166
1kpg_A_166	1kpg	A	CO3CARBONATE ION	H - 167
1kpg_A_166	1kpg	A	CO3CARBONATE ION	T - 168
1kpg_A_166	1kpg	A	CO3CARBONATE ION	I - 169
1kpg_A_166	1kpg	A	16ACETYL-TRIMETHYL-AMMONIUM	I - 169
1kpg_A_166	1kpg	A	MSESELENOMETHIONINE	I - 177
1nu4_A_40	1nu4	A	MLAMALONIC ACID	I - 40
1nu4_A_40	1nu4	A	MGMAGNESIUM ION	L - 41
1nu4_A_40	1nu4	A	MLAMALONIC ACID	L - 41
1nu4_A_40	1nu4	A	MGMAGNESIUM ION	D - 42
1nu4_A_40	1nu4	A	MLAMALONIC ACID	D - 42
1nu4_A_40	1nu4	A	MGMAGNESIUM ION	I - 43
1nu4_A_40	1nu4	A	MLAMALONIC ACID	I - 43
1nu4_A_40	1nu4	A	MGMAGNESIUM ION	L - 44
1nu4_A_40	1nu4	A	MLAMALONIC ACID	V - 45
1nu4_A_40	1nu4	A	MLAMALONIC ACID	S - 46
1nu4_A_40	1nu4	A	MLAMALONIC ACID	R - 47
1nu4_A_40	1nu4	A	MLAMALONIC ACID	S - 48
1nu4_A_40	1nu4	A	MLAMALONIC ACID	L - 49
1o6a_A_134	1o6a	A	MSESELENOMETHIONINE	I - 139
1o6a_A_134	1o6a	A	MSESELENOMETHIONINE	I - 142
1o6a_A_134	1o6a	A	MSESELENOMETHIONINE	V - 143
1o6a_A_134	1o6a	A	MSESELENOMETHIONINE	P - 145
1o6a_A_134	1o6a	A	MSESELENOMETHIONINE	R - 148
1okg_A_222	1okg	A	MSESELENOMETHIONINE	I - 229
1okg_A_222	1okg	A	MSESELENOMETHIONINE	R - 230
1okg_A_222	1okg	A	CACALCIUM ION	R - 230
1okg_A_222	1okg	A	MSESELENOMETHIONINE	H - 231
1okg_A_222	1okg	A	CACALCIUM ION	H - 231
1okg_A_222	1okg	A	MSESELENOMETHIONINE	N - 232
1okg_A_222	1okg	A	CACALCIUM ION	N - 232
1omh_A_81	1omh	A	MSESELENOMETHIONINE	G - 83
1omh_A_81	1omh	A	MSESELENOMETHIONINE	L - 84
1omh_A_81	1omh	A	MSESELENOMETHIONINE	D - 85
1omh_A_81	1omh	A	MSESELENOMETHIONINE	L - 86
1omh_A_81	1omh	A	MSESELENOMETHIONINE	T - 87
1omh_A_81	1omh	A	MSESELENOMETHIONINE	F - 88
1omh_A_81	1omh	A	MSESELENOMETHIONINE	S - 89
1omh_A_81	1omh	A	MSESELENOMETHIONINE	A - 90
1omh_A_81	1omh	A	MSESELENOMETHIONINE	P - 91
1q7h_A_56	1q7h	A	MSESELENOMETHIONINE	L - 56
1q7h_A_56	1q7h	A	MSESELENOMETHIONINE	I - 57
1q7h_A_56	1q7h	A	MSESELENOMETHIONINE	P - 58
1q7h_A_56	1q7h	A	MSESELENOMETHIONINE	S - 59
1q7h_A_56	1q7h	A	MSESELENOMETHIONINE	V - 60
1q7h_A_56	1q7h	A	MSESELENOMETHIONINE	Y - 61
1q7h_A_56	1q7h	A	MSESELENOMETHIONINE	L - 62
1q7h_A_56	1q7h	A	MSESELENOMETHIONINE	L - 63
1q7h_A_56	1q7h	A	MSESELENOMETHIONINE	Y - 65
1rxy_A_130	1rxy	A	GOLGLYCEROL	V - 131
1rxy_A_130	1rxy	A	GOLGLYCEROL	A - 132
1rxy_A_130	1rxy	A	GOLGLYCEROL	D - 133
1rxy_A_130	1rxy	A	GOLGLYCEROL	F - 134
1rxy_A_130	1rxy	A	GOLGLYCEROL	T - 137
1sox_A_116	1sox	A	HEMPROTOPORPHYRIN IX CONTAINING FE	L - 123
1ub0_A_46	1ub0	A	GOLGLYCEROL	V - 47
1ub0_A_46	1ub0	A	GOLGLYCEROL	V - 50
1ub0_A_46	1ub0	A	GOLGLYCEROL	L - 52
1ub0_A_46	1ub0	A	GOLGLYCEROL	L - 53
1ub0_A_46	1ub0	A	GOLGLYCEROL	P - 54
1ub0_A_46	1ub0	A	DOXDIOXANE	P - 55
1ub0_A_46	1ub0	A	GOLGLYCEROL	P - 55
1ub0_A_46	1ub0	A	DOXDIOXANE	E - 56
1ub0_A_46	1ub0	A	DOXDIOXANE	Y - 59
1ufa_A_203	1ufa	A	MSESELENOMETHIONINE	V - 208
1ufa_A_203	1ufa	A	MSESELENOMETHIONINE	D - 209
1ufa_A_203	1ufa	A	MSESELENOMETHIONINE	E - 210
1ufa_A_203	1ufa	A	MSESELENOMETHIONINE	L - 211
1ug6_A_73	1ug6	A	GOLGLYCEROL	R - 75

Clusters included in this Subclass

CLUSTER: EH.1.24

CLUSTER: EH.2.122

CLUSTER: EH.2.36

CLUSTER: EH.2.80

CLUSTER: EH.3.27

CLUSTER: EH.3.38

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