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Information on SUBCLASS 4.7.1
Subclass Accession number: 2384
Subclass: 4.7.1 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 17

Average sequence ID (%) : 14.7 +/- 18.2
Average RMSD (Å) : 1.041 +/- 0.173

Consensus geometry
d (Å): 15 delta (°): 90-135 theta (°): 90-135 rho (°): 180-225
Consensus Sequence: XpcXhpXX
(φψ)-conformation: aalbbbaa
Pattern: x[aegkqrs]x[aikltv]x[dehknqsty][GKQRS]x[acfimpvy][dnstv][anpqst]xx[dehqrt]
Conservation:-0.3010.2890.564-0.128-0.582-0.3332.516-1.180-1.0041.1870.508-1.093-0.6430.199
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1fgk_A_6691fgk   A669682PEALFDRIYTHQSDHHHHHH----HHHHaaaaaalbbbaaaa
1fmk_*_4311fmk   -431444PEAALYGRFTIKSDHHHHHH----HHHHaaaaaavxxbaaaa
1k2p_A_5661k2p   A566579PEVLMYSKFSSKSDHHHHHH----HHHHaaaaaalxxbaaaa
1kq3_A_1951kq3   A216229KRSVEEKSVTPALEHHHHHTT---HHHHaaaaaalbbbaaaa
1ks9_A_2611ks9   A266279RRARAHGIAVPENTHHHHHHT---HHHHaaaaaavbxbaaaa
1m66_A_3001m66   A310323RLAKQLKVKMPLCHHHHHHHT---HHHHaaaaaalbxbaaaa
1mp8_A_5911mp8   A591604PESINFRRFTSASDHHHHHH---SHHHHaaaaaalxbbaaaa
1n4k_A_4371n4k   A457470AGKLEKGTITQNERHHHHHTS---HHHHaaaaaaIbbxaaaa
1np7_A_3381np7   A345358RELNLTGFMSNRGRHHHHHHS---HHHHaaaaaavbbxaaaa
1ouo_A_2041ouo   A212225RIAKIQGNHNPFVQHHHHHHS---HHHHaaaaaavbxxaaaa
1owl_A_3321owl   A339352RQLTETGWMHNRCRHHHHHHS---HHHHaaaaaavbbxaaaa
1owl_A_4341owl   A434447PKDLISGEITPIERHHHHHHT---HHHHaaaaaavbbxaaaa
1oyz_A_1731oyz   A181194FAININKYDNSDIRHHHHHHT---HHHHaaaaaalxbbaaaa
1p4o_A_11511p4o   A11511164PESLKDGVFTTYSDHHHHHH----HHHHaaaaaavxbbaaaa
1qz4_A_51qz4   A2336QQLAHQGHCDADALHHHHHHS---HHHHaaaaaavbbpaaaa
1r0p_A_12521r0p   A12521265LESLQTQKFTTKSDHHHHHH----HHHHaaaaaalxbbaaaa
2pgd_*_2622pgd   -268281ISALEYGVPVTLIGHHHHHHT---HHHHaaaaaavbxxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1kq3_A_1951kq3   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL S - 239
1kq3_A_1951kq3   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL F - 243
1m66_A_3001m66   A     PLMPALMITIC ACID P - 320
1m66_A_3001m66   A     PLMPALMITIC ACID L - 321
1m66_A_3001m66   A     PLMPALMITIC ACID Q - 324
1m66_A_3001m66   A     PLMPALMITIC ACID I - 325
1m66_A_3001m66   A     PLMPALMITIC ACID I - 328
1np7_A_3381np7   A     FADFLAVIN-ADENINE DINUCLEOTIDE F - 352
1np7_A_3381np7   A     FADFLAVIN-ADENINE DINUCLEOTIDE M - 353
1np7_A_3381np7   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 354
1np7_A_3381np7   A     FADFLAVIN-ADENINE DINUCLEOTIDE N - 355
1np7_A_3381np7   A     FADFLAVIN-ADENINE DINUCLEOTIDE R - 356
1np7_A_3381np7   A     FADFLAVIN-ADENINE DINUCLEOTIDE R - 358
1np7_A_3381np7   A     FADFLAVIN-ADENINE DINUCLEOTIDE Q - 359
1np7_A_3381np7   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 362
1owl_A_3321owl   A     FADFLAVIN-ADENINE DINUCLEOTIDE W - 346
1owl_A_3321owl   A     FADFLAVIN-ADENINE DINUCLEOTIDE M - 347
1owl_A_3321owl   A     FADFLAVIN-ADENINE DINUCLEOTIDE H - 348
1owl_A_3321owl   A     FADFLAVIN-ADENINE DINUCLEOTIDE N - 349
1owl_A_3321owl   A     FADFLAVIN-ADENINE DINUCLEOTIDE R - 350
1owl_A_3321owl   A     FADFLAVIN-ADENINE DINUCLEOTIDE R - 352
1owl_A_3321owl   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 356
1oyz_A_1731oyz   A     MSESELENOMETHIONINE R - 176
1oyz_A_1731oyz   A     MSESELENOMETHIONINE N - 177
1oyz_A_1731oyz   A     MSESELENOMETHIONINE A - 180
1oyz_A_1731oyz   A     MSESELENOMETHIONINE D - 195
1oyz_A_1731oyz   A     MSESELENOMETHIONINE C - 196
1oyz_A_1731oyz   A     MSESELENOMETHIONINE F - 197
1oyz_A_1731oyz   A     MSESELENOMETHIONINE V - 198
1qz4_A_51qz4   A     HGMERCURY (II) ION L - 12
1qz4_A_51qz4   A     HGMERCURY (II) ION A - 13
1qz4_A_51qz4   A     HGMERCURY (II) ION I - 15
1qz4_A_51qz4   A     HGMERCURY (II) ION C - 16
1qz4_A_51qz4   A     HGMERCURY (II) ION Q - 17
1qz4_A_51qz4   A     HGMERCURY (II) ION L - 21
1qz4_A_51qz4   A     HGMERCURY (II) ION V - 22
1qz4_A_51qz4   A     HGMERCURY (II) ION Q - 24
1qz4_A_51qz4   A     HGMERCURY (II) ION L - 25
1qz4_A_51qz4   A     HGMERCURY (II) ION A - 26
1qz4_A_51qz4   A     HGMERCURY (II) ION H - 27
1qz4_A_51qz4   A     HGMERCURY (II) ION Q - 28
1qz4_A_51qz4   A     HGMERCURY (II) ION H - 30
1qz4_A_51qz4   A     HGMERCURY (II) ION C - 31
1qz4_A_51qz4   A     HGMERCURY (II) ION D - 32
1qz4_A_51qz4   A     HGMERCURY (II) ION A - 33
1qz4_A_51qz4   A     HGMERCURY (II) ION L - 36
1qz4_A_51qz4   A     HGMERCURY (II) ION I - 43

Clusters included in this Subclass
CLUSTER: HH.3.31
CLUSTER: HH.4.29