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Information on SUBCLASS 0.1.5
Subclass Accession number: 2555
Subclass: 0.1.5 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 21

Average sequence ID (%) : 7.4 +/- 12.7
Average RMSD (Å) : 0.514 +/- 0.146

Consensus geometry
d (Å): 3 delta (°): 0-45 theta (°): 45-90 rho (°): 225-270
Consensus Sequence: hXXp
(φψ)-conformation: bbaa
Pattern: [afgilmvy]xx[degkqst]x[filmpvwy]x
Conservation:-0.200-0.767-0.9101.6270.2690.946-0.965
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1amu_A_1981amu   A202208LEHKGISEESHHHHbxaaaaa
1b74_A_891b74   A9096FGVIEPGEESHHHHbbaaaaa
1dcs_*_2911dcs   -292298ATFQDWIEEHHHHHbbaaaaa
1jm1_A_591jm1   A6268ANIQQVQEEHHHHHbxaaaaa
1kew_A_2301kew   A234240LYVEDHAEEHHHHHbxaaaaa
1l0b_A_17771l0b   A17781784VMWDWVLEETHHHHbxaaaaa
1m7v_A_2351m7v   A235241YMGTEIGEEHHHHHxbaaaaa
1m9m_A_3571m9m   A357363YMSTEIGEEHHHHHxxaaaaa
1mwm_A_1391mwm   A146152MPESIPAEESHHHHbxaaaaa
1n62_B_6181n62   B623629KTMKELAEEHHHHHbxaaaaa
1n7h_A_2561n7h   A256262GFAGDYVEEHHHHHbxaaaaa
1nc5_A_1391nc5   A140146MWLDGLYEETHHHHbbaaaaa
1now_A_4011now   A404410VWQEVFDEETHHHHbxaaaaa
1o65_A_671o65   A7076YPREHYLEETHHHHbxaaaaa
1o6l_A_1771o6l   A183189LRKEVIIEEHHHHHbxaaaaa
1o7f_A_1331o7f   A138144IEQEDFKEEHHHHHbxaaaaa
1q35_A_1921q35   A195201GNSYYYGEETHHHHbxaaaaa
1qg8_A_1621qg8   A164170HRYSVLEEETHHHHbxaaaaa
1r6d_A_2141r6d   A218224VHTDDHCEEHHHHHbxaaaaa
1rkx_A_2331rkx   A233239QHVLEPLEETHHHHbxaaaaa
3thi_A_2333thi   A238244GYSESMMEETTHHHbxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1b74_A_891b74   A     DGND-GLUTAMINE V - 92
1kew_A_2301kew   A     TYDTHYMIDINE-5'- DIPHOSPHATE I - 230
1kew_A_2301kew   A     TYDTHYMIDINE-5'- DIPHOSPHATE R - 231
1kew_A_2301kew   A     TYDTHYMIDINE-5'- DIPHOSPHATE W - 233
1kew_A_2301kew   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE W - 233
1kew_A_2301kew   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE H - 239
1m7v_A_2351m7v   A     ARGARGININE Y - 235
1m7v_A_2351m7v   A     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 235
1m7v_A_2351m7v   A     ARGARGININE M - 236
1m7v_A_2351m7v   A     HEMPROTOPORPHYRIN IX CONTAINING FE M - 236
1m7v_A_2351m7v   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 238
1m7v_A_2351m7v   A     ARGARGININE E - 239
1m7v_A_2351m7v   A     HEMPROTOPORPHYRIN IX CONTAINING FE E - 239
1m7v_A_2351m7v   A     ARGARGININE I - 240
1m9m_A_3571m9m   A     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 357
1m9m_A_3571m9m   A     6NI6-NITROINDAZOLE Y - 357
1m9m_A_3571m9m   A     HEMPROTOPORPHYRIN IX CONTAINING FE M - 358
1m9m_A_3571m9m   A     6NI6-NITROINDAZOLE M - 358
1m9m_A_3571m9m   A     6NI6-NITROINDAZOLE S - 359
1m9m_A_3571m9m   A     HEMPROTOPORPHYRIN IX CONTAINING FE E - 361
1m9m_A_3571m9m   A     6NI6-NITROINDAZOLE E - 361
1mwm_A_1391mwm   A     MGMAGNESIUM ION E - 148
1mwm_A_1391mwm   A     ADPADENOSINE-5'-DIPHOSPHATE E - 148
1n7h_A_2561n7h   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE M - 265
1now_A_4011now   A     IFG(2R,3R,4S,5R)-2-ACETAMIDO-3,4-DIHYDROXY-5-HYDROXYMETHYL-PIPERIDINIUM W - 405
1now_A_4011now   A     IFG(2R,3R,4S,5R)-2-ACETAMIDO-3,4-DIHYDROXY-5-HYDROXYMETHYL-PIPERIDINIUM E - 407
1o6l_A_1771o6l   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER A - 179
1o6l_A_1771o6l   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER K - 181
1o6l_A_1771o6l   A     MNMANGANESE (II) ION K - 181
1o6l_A_1771o6l   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER L - 183
1q35_A_1921q35   A     FMTFORMIC ACID N - 196
1q35_A_1921q35   A     FMTFORMIC ACID Y - 198
1q35_A_1921q35   A     FMTFORMIC ACID Y - 199
1r6d_A_2141r6d   A     DAU2'DEOXY-THYMIDINE-5'-DIPHOSPHO-ALPHA-D-GLUCOSE V - 214
1r6d_A_2141r6d   A     DAU2'DEOXY-THYMIDINE-5'-DIPHOSPHO-ALPHA-D-GLUCOSE R - 215
1r6d_A_2141r6d   A     DAU2'DEOXY-THYMIDINE-5'-DIPHOSPHO-ALPHA-D-GLUCOSE E - 216
1r6d_A_2141r6d   A     DAU2'DEOXY-THYMIDINE-5'-DIPHOSPHO-ALPHA-D-GLUCOSE W - 217
1r6d_A_2141r6d   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE H - 223
1rkx_A_2331rkx   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE Y - 242
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1o6l_A_1771o6l   A AC1ANP BINDING SITE FOR CHAIN AA - 179
1o6l_A_1771o6l   A AC1ANP BINDING SITE FOR CHAIN AK - 181

Clusters included in this Subclass
CLUSTER: EH.0.23
CLUSTER: EH.1.35