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Information on SUBCLASS 3.4.1
Subclass Accession number: 3787
Subclass: 3.4.1 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 27

Average sequence ID (%) : 10.3 +/- 14.5
Average RMSD (Å) : 0.589 +/- 0.206

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 90-135 rho (°): 225-270
Consensus Sequence: phXpXXh
(φψ)-conformation: bbababb
Pattern: x[dehknprst][acfilptv]xx[dekprst]x[afgilmpvy]xx
Conservation:0.6600.2970.042-1.172-0.1021.867-1.4680.408-0.533-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1an8_*_1211an8   -121128.ILEKDIVT..EE--SEEE..bbababbx.
1dzf_A_781dzf   A8188EFCDEPSV..EE-SSSEE..bbxababx..
1e1a_A_2611e1a   A263272IRCPFEKPSNEE-SSS-EEEbxbababwab
1eep_A_401eep   A4047.SLNIPFLS..EESSSEEE..bbababbx.
1ep3_A_141ep3   A1422LDLKNPIIP.EEESSSEEE.bbxabaxbx.
1et9_A_1161et9   A118126ITVNKPKVT.EEE-SSEEE.bbbababbx.
1eu3_A_1221eu3   A122129.STNKTTVT..EES-SEEE..bbaxabbx.
1f76_A_531f76   A5360.TFKNPLGL..EESSSEEE..bxabaxbx.
1gox_*_671gox   -6775FKISMPIMI.EEESSSEEE.bxbababbb.
1gvo_A_141gvo   A1422VTAPNRVFM.EEESSSEEE.bbxababxx.
1gwj_A_201gwj   A2028LSLPNRVIM.EEES-SEEE.bxbababxx.
1h7w_A_5401h7w   A540548LKFINPFGL.EEESSSEEE.bbbabaxbx.
1icp_A_251icp   A2533FELCHRVVL.EEES-SEEE.bbxabaxbx.
1ix1_A_701ix1   A7887FEPLTEDMDQEEES-S-EEEbbxabaxbbb
1kbi_A_1861kbi   A186194SHVDVPFYV.EEESSSEEE.bxbababbx.
1mbm_A_1821mbm   A182190IIADVDAVP.EE--SSEEE.bxxababbp.
1n62_B_501n62   B5564VRSSHAHARIEE-S-SSEEExbxababbxx
1o94_A_181o94   A1826KTLRNRFYQ.EEESSSEEE.bbxabaxbx.
1oyb_*_251oyb   -2532NELLHRAV..EEESSSEE..bbxababb..
1p0k_A_521p0k   A5261LSSSSPIFINEEES-SEEEExbbababbxb
1ps9_A_151ps9   A1522.TLKNRVLM..EESSSEEE..bxababbx.
1qft_A_291qft   A3239VKATYKND..EEES-SEE..abbababb..
1tbg_A_881tbg   A93102IPLRSSWVMTEE-S-S-EEExwbabaxxab
1utc_A_2921utc   A295304MNRISGETIFEEE--SS-EEbbbababpxa
1ute_A_1111ute   A111120WNFPSPYYRLEE--SSSEEExbbababbbb
1vji_A_211vji   A2129FNLSHRVVL.EEES-SEEE.xxxabaxxx.
1zfj_A_421zfj   A4250LTLNIPIIT.EEESSS-EE.bbbababbx.
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1e1a_A_2611e1a   A     CACALCIUM ION S - 271
1e1a_A_2611e1a   A     CACALCIUM ION N - 272
1e1a_A_2611e1a   A     CACALCIUM ION L - 273
1e1a_A_2611e1a   A     CACALCIUM ION H - 274
1e1a_A_2611e1a   A     CACALCIUM ION F - 275
1f76_A_531f76   A     MSESELENOMETHIONINE F - 54
1ix1_A_701ix1   A     MHA(CARBAMOYLMETHYL-CARBOXYMETHYL-AMINO)-ACETIC ACID P - 70
1ix1_A_701ix1   A     MHA(CARBAMOYLMETHYL-CARBOXYMETHYL-AMINO)-ACETIC ACID R - 71
1ix1_A_701ix1   A     MHA(CARBAMOYLMETHYL-CARBOXYMETHYL-AMINO)-ACETIC ACID V - 72
1ix1_A_701ix1   A     MHA(CARBAMOYLMETHYL-CARBOXYMETHYL-AMINO)-ACETIC ACID F - 73
1ix1_A_701ix1   A     MHA(CARBAMOYLMETHYL-CARBOXYMETHYL-AMINO)-ACETIC ACID L - 81
1ix1_A_701ix1   A     BB2ACTINONIN Y - 88
1ix1_A_701ix1   A     BB2ACTINONIN Q - 89
1ix1_A_701ix1   A     BB2ACTINONIN E - 90
1kbi_A_1861kbi   A     MPD2-METHYL-2,4-PENTANEDIOL S - 186
1kbi_A_1861kbi   A     MPD2-METHYL-2,4-PENTANEDIOL H - 187
1p0k_A_521p0k   A     PO4PHOSPHATE ION N - 61
1qft_A_291qft   A     HSMHISTAMINE Y - 29
1qft_A_291qft   A     HSMHISTAMINE M - 31
1qft_A_291qft   A     HSMHISTAMINE Y - 36
1qft_A_291qft   A     HSMHISTAMINE D - 39
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1e1a_A_2611e1a   A DFPDFP BINDING SITES - 271
1e1a_A_2611e1a   A AC2CA BINDING SITE FOR CHAIN AL - 273
1e1a_A_2611e1a   A AC2CA BINDING SITE FOR CHAIN AH - 274

Clusters included in this Subclass
CLUSTER: AR.2.33
CLUSTER: AR.3.31
CLUSTER: AR.4.25
CLUSTER: AR.5.156
CLUSTER: AR.5.92