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Information on SUBCLASS 4.9.1
Subclass Accession number: 3916
Subclass: 4.9.1 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 24

Average sequence ID (%) : 18.6 +/- 22.2
Average RMSD (Å) : 0.554 +/- 0.191

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: hXhGpXXp
(φψ)-conformation: bbpgbpbb
Pattern: xx[acfglmtv]xx[gn]xxx[adeknqrt]x
Conservation:-0.473-0.359-0.186-0.503-0.4392.945-0.090-0.455-0.4690.187-0.157
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ahs_A_2151ahs   A215225VNVAAGDVVAWEEE-TT--EEExxbxxvxxbxb
1b56_*_621b56   -6575FSCTLGEKFEEEEEETT--EEEbbbbpvbxbxb
1cbs_*_601cbs   -6373INFKVGEEFEEEEEETTS-EEEbbbbpvbxbbb
1crb_*_601crb   -6272MDFQVGKEFEEEEEETT--EEEbbbbpvbxbxx
1cyx_*_1811cyx   -183193IYAMAGMQTRLEEE-TT--EEEbxbbxvbbbbb
1f97_A_361f97   A3747VQVPENESIKLEEEETT--EEExbbxpvbxbbx
1ftp_A_611ftp   A6474FTFKLGEEFDEEEEETT--EEEbbbbpvbpbxb
1ggl_A_601ggl   A6272VQFDVGVEFEEEEEETTS-EEEbbbbxvbpbxb
1hnf_*_71hnf   -919TWGALGQDINLEEEETTS-EEEbbbbpgbxbbb
1j1t_A_1351j1t   A141151GTMTSGETFNLEEEETT-EEEEebbbpgxbbxb
1kqw_A_601kqw   A6272VNFVIGEEFDEEEEETT--EEEbbbbpvbxbxb
1l7l_A_141l7l   A1828IIYNPGDVITIEEE-TT--EEExbxbpvxbbbb
1lpj_A_601lpj   A6272VKFKVGEEFDEEEEETT--EEEbbbbpvbpbxb
1m56_B_2261m56   B228238QDAVPGRLAQLEEE-TT--EEEbxbbpvbbbbb
1o8v_A_651o8v   A6573..FKLGEKFKE..EETT--EEE..bbxvbpbxb
1opb_A_601opb   A6272LDFTVGVEFDEEEEETT--EEEbbbbpvbxbxb
1p6p_A_561p6p   A6070NSFTVGKESEIEEEETTS-EEEbbbbpvbpbxx
1pzd_A_6951pzd   A696706RSLPYNQPGTCEEE-BT--EEEabbxplbpbbb
1qwr_A_1641qwr   A165175YYVPSGTLHALEEE-TT--EEEbxbppvxxbbx
1r4x_A_6951r4x   A696706RSLPYNQPGTCEEE-TT--EEEabbxplbwbbb
1r64_A_5661r64   A573583KTTENGHRIDFEESSTT--EEEbbabpgxxbbx
1rh1_A_621rh1   A6272SVLFPGIIRRIEEE-TT--EEEbbxxxvxxbxb
1v54_B_1701v54   B172182TDAIPGRLNQTEEE-TT--EEEbxbbxvbbxbb
1vca_A_1031vca   A103111..LEAGKPITV..EETTS-EEE..xbpvbxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1b56_*_621b56   *     PLMPALMITIC ACID T - 63
1crb_*_601crb   *     RTLRETINOL Y - 60
1crb_*_601crb   *     RTLRETINOL M - 62
1hnf_*_71hnf   *     NAGN-ACETYL-D-GLUCOSAMINE L - 13
1hnf_*_71hnf   *     NAGN-ACETYL-D-GLUCOSAMINE N - 18
1kqw_A_601kqw   A     RTLRETINOL V - 62
1kqw_A_601kqw   A     RTLRETINOL F - 64
1l7l_A_141l7l   A     CACALCIUM ION S - 35
1m56_B_2261m56   B     MGMAGNESIUM ION D - 229
1m56_B_2261m56   B     PEHDI-STEAROYL-3-SN-PHOSPHATIDYLETHANOLAMINE R - 234
1o8v_A_651o8v   A     CSOS-HYDROXYCYSTEINE F - 65
1o8v_A_651o8v   A     CSOS-HYDROXYCYSTEINE F - 71
1o8v_A_651o8v   A     CSOS-HYDROXYCYSTEINE E - 73
1opb_A_601opb   A     RETRETINAL Y - 60
1opb_A_601opb   A     RETRETINAL L - 62
1opb_A_601opb   A     RETRETINAL F - 64
1qwr_A_1641qwr   A     ZNZINC ION V - 167
1qwr_A_1641qwr   A     ZNZINC ION H - 173
1r4x_A_6951r4x   A     CASS-(DIMETHYLARSENIC)CYSTEINE Y - 707
1r4x_A_6951r4x   A     CASS-(DIMETHYLARSENIC)CYSTEINE T - 708
1r4x_A_6951r4x   A     CASS-(DIMETHYLARSENIC)CYSTEINE L - 709
1r4x_A_6951r4x   A     CASS-(DIMETHYLARSENIC)CYSTEINE V - 710
1r64_A_5661r64   A     NAGN-ACETYL-D-GLUCOSAMINE N - 577
1r64_A_5661r64   A     NAGN-ACETYL-D-GLUCOSAMINE G - 578
1r64_A_5661r64   A     NAGN-ACETYL-D-GLUCOSAMINE H - 579
1r64_A_5661r64   A     NAGN-ACETYL-D-GLUCOSAMINE R - 580
1v54_B_1701v54   B     MGMAGNESIUM ION D - 173
1v54_B_1701v54   B     PGV(1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY) PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE R - 178

Clusters included in this Subclass
CLUSTER: AR.4.36
CLUSTER: AR.5.15
CLUSTER: AR.6.38