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Information on SUBCLASS 2.1.5
Subclass Accession number: 470
Subclass: 2.1.5 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 31

Average sequence ID (%) : 10.6 +/- 11.9
Average RMSD (Å) : 0.665 +/- 0.164

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: XXpcXX
(φψ)-conformation: bblgbb
Pattern: [dehknqrsty]x[acfgiklmtv]xxxxx[adegknqrs][DEGKN][cehknqrst]xxxx
Conservation:0.006-0.341-0.099-0.590-0.301-0.310-0.212-0.3010.1533.5010.152-0.467-0.066-0.711-0.413
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a1x_*_851a1x   -87101QIQHHLMVRGVQELLEEEEEEEETTEEEEExxabbbxblvbxbbb
1b65_A_1941b65   A197211TASRVVEFGGRSFTIEEEEEEEETTEEEEEbbbbbbxblvbbbbb
1bj7_*_501bj7   -5266SITFYLKDQGTCLLLEEEEEEEETTEEEEEbbbbbbxblvbxxxb
1ckm_A_861ckm   A88102FMMFFTRVFGFKVCTEEEEEEEETTEEEEEbxbbxbbblvxxbbb
1d2s_A_651d2s   A6579DWFMLGLRDGRPEIQEEEEEEEETTEEEEEbbbbbbbblgbpbbb
1deu_A_1801deu   A183197SVAGWGISDGTEYWIEEEEEEEETTEEEEEbbaebbbblvbxbxx
1dle_A_1331dle   A135149KALFVSEEEKKLTRKEEEEEEEETTEEEEEpbbbxbbbvgbxbxb
1dzk_A_501dzk   A5266YLNFFSKENGICEEFEEEEEEEETTEEEEEbbbbbbbblvbxbbb
1epa_A_371epa   A3751GAMVVELKENLLALTEEEEEEEETTEEEEEbbbbbbbblvbbbbb
1ew0_A_2251ew0   A230244LAVGEMRSGGERFFTEEEEEEEETTEEEEEbbbbbbbblvbbbxb
1ggx_A_1041ggx   A107121VTQDSSLQDGCFIYKEEEEEEEETTEEEEEbbbbbbbblvbxbbb
1ggx_A_1461ggx   A146160STERLYPRDGVLKGEEEEEEEEETTEEEEEbbxbbbxblvbbbbb
1gyv_A_7941gyv   A795809RIKLTYNHKGSAMQDEEEEEEEETTEEEEEbbbbbbbblvbxbbb
1h30_A_3441h30   A344358TWIVLALRAGRLELQEEEEEEEETTEEEEEbbbbbbbblvbxbbb
1hq0_A_9711hq0   A975989SATVLVRVDGNVVVREEEEEEEETTEEEEEbbbbbbxblvbxbbb
1j7n_A_5251j7n   A530544KDVQIIKQSEKEYIREEEEEEEETTEEEEEabbbxbbblvbxbbx
1ko3_A_521ko3   A5468SHIATQSFDGAVYPSEEEEEEEETTEEEEEbbbbbbxbvgxbbwb
1koi_A_411koi   A4256AALAAGTASGKLKEAEEEEEEEETTEEEEEebbbbbxblvbxbbb
1kqr_A_1121kqr   A114128SETRSYTLFGTQEQIEEEEEEEETTEEEEEpbxbbbxblvbxbxb
1l6m_A_641l6m   A6579NVTSVLFRKKKCDYWEEEEEEEETTEEEEExbbbbbxblUbbbbb
1mdw_A_2641mdw   A267281TGAEEVESSGSLQKLEEEEEEEETTEEEEEabbbbbxblvbxbxb
1mol_A_521mol   A5771EYQLYVYASDKLFRAEEEEEEEETTEEEEEbbbbbbxblvbbbbb
1o7i_A_681o7i   A7286ENAWTTAFKGQVQLNEEEEEEEETTEEEEEbvxbbbbblvbxbxb
1qq9_A_511qq9   A5266TTLQQFTSGGATGYNEEEEEEEETTEEEEEbbbbxbbbvvbxbbb
1qzg_A_1041qzg   A108122HQITLRSYRDRTQGLEEEEEEEETTEEEEEbvbxbbxblvbxbbb
1r0u_A_201r0u   A2842TTGFYYVKQNKVYLSEEEEEEEETTEEEEEbbbbbbbblvbxbbb
1rh1_A_1631rh1   A169183YRLTDLMQNGTQYMAEEEEEEEETTEEEEEbbbbbbxbvvbxbbb
1tgo_A_671tgo   A6882AEKVKKKFLGRPIEVEEEEEEEETTEEEEEbbxbbbbblvbwbbb
1uch_*_1681uch   -169183HFIALVHVDGHLYELEEEEEEEETTEEEEEbbbbbbbblvbxbxb
1v3e_A_5281v3e   A531545TTTSCITHYNKGYCFEEEEEEEETTEEEEEbbbbbbbblgxxbbb
3sil_*_983sil   -101115PTCIVANIQGRETILEEEEEEEEETTEEEExbbbbbxblvxxbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ckm_A_861ckm   A     GTPGUANOSINE-5'-TRIPHOSPHATE I - 86
1ckm_A_861ckm   A     GTPGUANOSINE-5'-TRIPHOSPHATE R - 87
1d2s_A_651d2s   A     CACALCIUM ION D - 65
1d2s_A_651d2s   A     DHTDIHYDROTESTOSTERONE D - 65
1d2s_A_651d2s   A     DHTDIHYDROTESTOSTERONE W - 66
1d2s_A_651d2s   A     DHTDIHYDROTESTOSTERONE F - 67
1d2s_A_651d2s   A     DHTDIHYDROTESTOSTERONE L - 80
1d2s_A_651d2s   A     DHTDIHYDROTESTOSTERONE H - 81
1dzk_A_501dzk   A     PRZ2-ISOBUTYL-3-METHOXYPYRAZINE L - 53
1dzk_A_501dzk   A     PRZ2-ISOBUTYL-3-METHOXYPYRAZINE F - 55
1dzk_A_501dzk   A     PRZ2-ISOBUTYL-3-METHOXYPYRAZINE L - 68
1ew0_A_2251ew0   A     HEMPROTOPORPHYRIN IX CONTAINING FE M - 228
1ew0_A_2251ew0   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 230
1ew0_A_2251ew0   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 232
1ew0_A_2251ew0   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 233
1ew0_A_2251ew0   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 243
1ew0_A_2251ew0   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 244
1ew0_A_2251ew0   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 245
1ew0_A_2251ew0   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 246
1ew0_A_2251ew0   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 247
1ggx_A_1041ggx   A     CRQ[2-(3-CARBAMOYL-1-IMINO-PROPYL)-4-(4-HYDROXY-BENZYLIDENE)-5-OXO-4,5-DIHYDRO-IMIDAZOL-1-YL]-ACETIC ACID Q - 109
1ggx_A_1041ggx   A     CRQ[2-(3-CARBAMOYL-1-IMINO-PROPYL)-4-(4-HYDROXY-BENZYLIDENE)-5-OXO-4,5-DIHYDRO-IMIDAZOL-1-YL]-ACETIC ACID S - 111
1ggx_A_1041ggx   A     CRQ[2-(3-CARBAMOYL-1-IMINO-PROPYL)-4-(4-HYDROXY-BENZYLIDENE)-5-OXO-4,5-DIHYDRO-IMIDAZOL-1-YL]-ACETIC ACID Y - 120
1ggx_A_1461ggx   A     CRQ[2-(3-CARBAMOYL-1-IMINO-PROPYL)-4-(4-HYDROXY-BENZYLIDENE)-5-OXO-4,5-DIHYDRO-IMIDAZOL-1-YL]-ACETIC ACID S - 146
1ggx_A_1461ggx   A     CRQ[2-(3-CARBAMOYL-1-IMINO-PROPYL)-4-(4-HYDROXY-BENZYLIDENE)-5-OXO-4,5-DIHYDRO-IMIDAZOL-1-YL]-ACETIC ACID T - 147
1ggx_A_1461ggx   A     CRQ[2-(3-CARBAMOYL-1-IMINO-PROPYL)-4-(4-HYDROXY-BENZYLIDENE)-5-OXO-4,5-DIHYDRO-IMIDAZOL-1-YL]-ACETIC ACID E - 148
1ggx_A_1461ggx   A     CRQ[2-(3-CARBAMOYL-1-IMINO-PROPYL)-4-(4-HYDROXY-BENZYLIDENE)-5-OXO-4,5-DIHYDRO-IMIDAZOL-1-YL]-ACETIC ACID I - 161
1ggx_A_1461ggx   A     CRQ[2-(3-CARBAMOYL-1-IMINO-PROPYL)-4-(4-HYDROXY-BENZYLIDENE)-5-OXO-4,5-DIHYDRO-IMIDAZOL-1-YL]-ACETIC ACID K - 163
1koi_A_411koi   A     HEMPROTOPORPHYRIN IX CONTAINING FE C - 41
1koi_A_411koi   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 42
1koi_A_411koi   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 43
1koi_A_411koi   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 44
1koi_A_411koi   A     HEMPROTOPORPHYRIN IX CONTAINING FE E - 55
1koi_A_411koi   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 57
1koi_A_411koi   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 59
1koi_A_411koi   A     NMONITROGEN MONOXIDE H - 59
1l6m_A_641l6m   A     DBH2,3-DIHYDROXY-BENZOIC ACID S - 68
1l6m_A_641l6m   A     DBH2,3-DIHYDROXY-BENZOIC ACID L - 70
1l6m_A_641l6m   A     FEFE (III) ION W - 79
1l6m_A_641l6m   A     DBH2,3-DIHYDROXY-BENZOIC ACID W - 79
1l6m_A_641l6m   A     DBH2,3-DIHYDROXY-BENZOIC ACID I - 80
1l6m_A_641l6m   A     FEFE (III) ION R - 81
1l6m_A_641l6m   A     DBH2,3-DIHYDROXY-BENZOIC ACID R - 81
1l6m_A_641l6m   A     DBS2-(2,3-DIHYDROXY-BENZOYLAMINO)-3-HYDROXY-PROPIONIC ACID R - 81
1l6m_A_641l6m   A     DBH2,3-DIHYDROXY-BENZOIC ACID F - 83
1qzg_A_1041qzg   A     TTHYMIDINE-5'-MONOPHOSPHATE R - 113
1qzg_A_1041qzg   A     TTHYMIDINE-5'-MONOPHOSPHATE Y - 115
1qzg_A_1041qzg   A     TTHYMIDINE-5'-MONOPHOSPHATE Q - 120
1r0u_A_201r0u   A     GOLGLYCEROL F - 26
1r0u_A_201r0u   A     GOLGLYCEROL Y - 43
1r0u_A_201r0u   A     GOLGLYCEROL E - 45
1v3e_A_5281v3e   A     ZMRZANAMIVIR Y - 530
3sil_*_983sil   *     GOLGLYCEROL M - 99
3sil_*_983sil   *     GOLGLYCEROL D - 100
3sil_*_983sil   *     GOLGLYCEROL C - 103
3sil_*_983sil   *     GOLGLYCEROL I - 104
3sil_*_983sil   *     GOLGLYCEROL V - 105
3sil_*_983sil   *     GOLGLYCEROL A - 106
3sil_*_983sil   *     GOLGLYCEROL N - 107
3sil_*_983sil   *     GOLGLYCEROL E - 112
3sil_*_983sil   *     GOLGLYCEROL T - 113
3sil_*_983sil   *     GOLGLYCEROL K - 120
3sil_*_983sil   *     GOLGLYCEROL W - 121
3sil_*_983sil   *     GOLGLYCEROL N - 122
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1h30_A_3441h30   A SO2SO4 BINDING SITE FOR CHAIN AR - 360
1uch_*_1681uch   * CATACTIVE SITE RESIDUES.H - 169

Clusters included in this Subclass
CLUSTER: HA.1.13
CLUSTER: HA.2.27
CLUSTER: HA.2.35
CLUSTER: HA.3.15