Information on SUBCLASS 2.2.4 |
Subclass Accession number: 5350
Subclass: 2.2.4 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 35 Average sequence ID (%) : 14.7 +/- 16.7 Average RMSD (Å) : 0.706 +/- 0.192 Consensus geometry
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Consensus Sequence: | XXXpXh |
(φψ)-conformation: | aapabb |
Pattern: | x | x | [afilmpvwy] | [afilmvy] | [aegknqrst] | x | x | [dehknq] | x | [acfilpvwy] | [iltvw] |
Conservation: | -0.943 | -0.215 | -0.482 | -0.180 | 0.080 | -0.646 | -0.411 | 2.650 | -0.796 | 0.240 | 0.703 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
16pk_*_145 | 16pk | - | 153 | 163 | KILASYGDVYI | HHHHTT-SEEE | aaaaaababbb |
1ax4_A_246 | 1ax4 | A | 251 | 261 | FDMYKYADALT | HHHGGG-SEEE | aaaaaababbb |
1bg6_*_69 | 1bg6 | - | 70 | 80 | GLAVKDADVIL | HHHHTT-SEEE | aaaaaaxabbb |
1brm_A_60 | 1brm | A | 60 | 70 | LEALKALDIIV | HHHHHT-SEEE | aaaaaaxabbb |
1d2k_A_224 | 1d2k | A | 225 | 235 | AEMDKYLDFWN | HHHHTT-SEEE | aaaaaaxabbb |
1ff9_A_59 | 1ff9 | A | 63 | 73 | DAEVAKHDLVI | HHHHTTSSEEE | aaaaaababbb |
1fzq_A_75 | 1fzq | A | 79 | 89 | RSYFENTDILI | HHHHTT-SEEE | aaaaaaxabbb |
1g3q_A_125 | 1g3q | A | 128 | 138 | MSAMLSGEEAL | HHHHTT-SEEE | aaaaaaxabbb |
1gc5_A_227 | 1gc5 | A | 228 | 238 | EEITRNVELAI | HHHHTT-SEEE | aaaaaababbb |
1i1q_B_37 | 1i1q | B | 40 | 50 | IDRLATMKNPV | HHHHTT-SSEE | aaaaaaxabwb |
1j6u_A_359 | 1j6u | A | 361 | 371 | AKALQLADEVV | HHHHTTSSEEE | aaaaaaxabbb |
1j7x_A_135 | 1j7x | A | 135 | 145 | WEPITITENLI | HHHHTT-SEEE | aaaaaaxabbb |
1jnd_A_207 | 1jnd | A | 208 | 218 | PALNGLVDFVN | HHHHTT-SEEE | aaaaaababbb |
1jsm_A_98 | 1jsm | A | 102 | 112 | KHLLSSTNHFE | HHHHTT-SEEE | aaaaaababbx |
1k1e_A_129 | 1k1e | A | 129 | 138 | IYVKNAVDHV. | HHHHTTSSEE. | aaaaaaxabx. |
1ka9_H_83 | 1ka9 | H | 83 | 92 | VGMQVLYEGS. | HHHHTTSSEE. | aaaaaaxabb. |
1l2l_A_222 | 1l2l | A | 223 | 233 | EEIAKRSELAI | HHHHTT-SEEE | aaaaaababbb |
1l2t_A_206 | 1l2t | A | 206 | 216 | INVARFGERII | HHHHTTSSEEE | aaaaaaxabbx |
1l7d_A_61 | 1l7d | A | 62 | 72 | AQALSQADVVW | HHHHSS-SEEE | aaaaaaxabbb |
1moq_*_453 | 1moq | - | 458 | 468 | AEDFSDKHHAL | HHHHTT-SEEE | aaaaaaxabbb |
1mr3_F_76 | 1mr3 | F | 79 | 89 | RHYYRNTEGVI | HHHHHT-SEEE | aaaaaaxabbb |
1nwc_A_61 | 1nwc | A | 61 | 71 | IEELKKLDIIV | HHHHTT-SEEE | aaaaaaxabbb |
1oc2_A_66 | 1oc2 | A | 70 | 80 | DKLAAKADAIV | HHHHTT-SEEE | aaaaaababbb |
1pbt_A_172 | 1pbt | A | 172 | 182 | FRALNTSLYVL | HHHHTT-SEEE | aaaaaaxabbb |
1php_*_128 | 1php | - | 132 | 142 | KAFAELADLYV | HHHHTT-SEEE | aaaaaababbb |
1qpg_*_141 | 1qpg | - | 149 | 159 | HELSSLADVYI | HHHHHT-SEEE | aaaaaababbb |
1qyc_A_68 | 1qyc | A | 72 | 82 | VEAVKNVDVVI | HHHHHT-SEEE | aaaaaababbb |
1rcu_A_90 | 1rcu | A | 91 | 101 | FVLLRNADVVV | HHHHTT-SEEE | aaaaaababbb |
1tpl_A_237 | 1tpl | A | 242 | 252 | HEMFSYADGCT | HHHHHTSSEEE | aaaaaababbb |
1ual_A_96 | 1ual | A | 99 | 109 | VTELAQNQKLI | HHHHTT-SEEE | aaaaaaxabbb |
1uqt_A_169 | 1uqt | A | 173 | 183 | LEQLCDYDLLG | HHHHTTSSEEE | aaaaaaxabbb |
1vjd_A_143 | 1vjd | A | 151 | 161 | ASLSKLGDVYV | HHHTTS-SEEE | aaaaaababbb |
1vpe_*_128 | 1vpe | - | 132 | 142 | KFWASLADIHV | HHHHTT-SEEE | aaaaaababbb |
2dnj_A_19 | 2dnj | A | 26 | 36 | VRIVRRYDIVL | HHHHHT-SEEE | aaaaaababbx |
5nul_*_40 | 5nul | - | 40 | 50 | IDELLNEDILI | HHHHTT-SEEE | aaaaaaxabxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1ax4_A_246 | 1ax4 | A | LPAPYRIDOXAL 5-PHOSPHATE BINDING SITE. | S - 263 |
Clusters included in this Subclass |
CLUSTER: HE.3.38 |
CLUSTER: HE.4.27 |
CLUSTER: HE.4.342 |
CLUSTER: HE.5.17 |
CLUSTER: HE.5.247 |