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Information on SUBCLASS 2.7.1
Subclass Accession number: 5429
Subclass: 2.7.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 20

Average sequence ID (%) : 11.2 +/- 13.7
Average RMSD (Å) : 0.795 +/- 0.196

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 45-90 rho (°): 90-135
Consensus Sequence: XXXXhX
(φψ)-conformation: aappbb
Pattern: xx[AFGIKL][aeknqrs][aegknqrst]x[adegkrt][afikltv]xx
Conservation:0.253-1.6861.5230.6710.322-0.7930.3590.467-1.116-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a9n_A_61a9n   A716ELIEQAAQYTHHHHTS-EEEaaaaaxpbbx
1bdf_A_781bdf   A8391LNLKGLAVR.HHHHT--EE.aaaaaxxbb.
1cke_A_571cke   A6271PLASHLDVRFHHHHT--EEEaaaaapxbbb
1e2h_A_3061e2h   A317326KRLRSMHVFIHHHHT-EEEEaaaaaxbxbb
1g5h_A_1381g5h   A147155NLLKTSGKL.HHHHHS-EE.aaaaaxxbx.
1gu2_A_281gu2   A3240KIFFNRKFK.HHHHH--EE.aaaaaxxbx.
1hxs_3_431hxs   34452MELAEIDTM.HHHHTS-EE.aaaaaxpbx.
1hyu_A_2021hyu   A205214EALNKRDAYDHHHHTS--EEaaaaaxxxxa
1ihu_A_2651ihu   A265274ADLAGLPTDTHHHHTS-EEEaaaaaxwbbb
1jer_*_211jer   -2432QWAAGKTFR.HHHHT--EE.aaaaabbbb.
1k75_A_2961k75   A300309QALNASRLIVHHHTT-EEEEaaaaaxbbbx
1kkh_A_1821kkh   A186195EFLKNCKFLIHHHHT--EEEaaaaaxbbbx
1np3_A_111np3   A1221SIIQGKKVAIHHHHTS-EEEaaaaabxbbb
1nzj_A_1541nzj   A154163EKLAREDFIIHHHHHS--EEaaaaaxxxxa
1ori_A_2071ori   A211220DVAIKEPLVDHHHHTS-EEEaaaaabpbbb
1qb7_A_181qb7   A2230LLKKSYRWY.HHHHH--EE.aaaaapbbb.
1rxx_A_2001rxx   A200209PEFANAEFEIHHHHTS--EEaaaaaxbbxb
1ucr_A_151ucr   A1523KSGSKSKFY.HHHHSS-EE.apgaabbbb.
1usu_A_4361usu   A438447ALAKLLRYNSHHHTT-EEEEaaaaaxbbxb
3adk_*_23adk   -312EKLKKSKIIFHHHHTS-EEEaaaaaxxbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gu2_A_281gu2   A     HECHEME C F - 34
1gu2_A_281gu2   A     HECHEME C F - 35
1gu2_A_281gu2   A     HECHEME C F - 39
1hyu_A_2021hyu   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 218
1ihu_A_2651ihu   A     ADPADENOSINE-5'-DIPHOSPHATE L - 275
1ihu_A_2651ihu   A     ADPADENOSINE-5'-DIPHOSPHATE F - 276
1k75_A_2961k75   A     MSESELENOMETHIONINE R - 306
1rxx_A_2001rxx   A     MSESELENOMETHIONINE F - 202
1usu_A_4361usu   A     GOLGLYCEROL K - 441
1usu_A_4361usu   A     GOLGLYCEROL L - 442
1usu_A_4361usu   A     GOLGLYCEROL R - 444
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gu2_A_281gu2   A HEAHEC BINDING SITE FOR CHAIN AF - 34
1usu_A_4361usu   A AC1GOL BINDING SITE FOR CHAIN AK - 441

Clusters included in this Subclass
CLUSTER: HE.2.40
CLUSTER: HE.2.62
CLUSTER: HE.3.76
CLUSTER: HE.4.90