Information on SUBCLASS 3.8.2 |
Subclass Accession number: 5525
Subclass: 3.8.2 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 15 Average sequence ID (%) : 16.1 +/- 17.1 Average RMSD (Å) : 0.680 +/- 0.265 Consensus geometry
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Consensus Sequence: | XhXGpph |
(φψ)-conformation: | aapgpbb |
Pattern: | x | [dehnrstw] | [CFILMV] | x | [adekqrs] | x | [ILTVY] | x | [DG] | x | [deksty] | [hilmv] | x |
Conservation: | -0.603 | -0.911 | 0.820 | -0.475 | -0.037 | -0.764 | 0.470 | -0.727 | 2.666 | -0.091 | -0.306 | 0.805 | -0.848 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1c7q_A_117 | 1c7q | A | 121 | 133 | SHLLDVLEGKDLS | HHHHHHHTT--EE | aaaaaaaxvbxbb |
1d2n_A_696 | 1d2n | A | 700 | 712 | TTIAQQVKGKKVW | HHHHHHHTTSEEE | aaaaaaapgxxbb |
1df7_A_25 | 1df7 | A | 29 | 41 | AHFREITMGHTIV | HHHHHHHTTSEEE | aaaaaaapvbxbb |
1ee8_A_3 | 1ee8 | A | 11 | 23 | RRLRPLVLGQTLR | HHHHHHHTT-EEE | aaaaaaapvxxxa |
1ex2_A_86 | 1ex2 | A | 90 | 102 | ASMLRRLSGRSHS | HHHHHHHTTSEEE | aaaaaaaplbbbb |
1fsg_A_49 | 1fsg | A | 61 | 73 | YDIHRTYFGEELH | HHHHHHHTTS-EE | aaaaaaapvxxbb |
1h32_A_177 | 1h32 | A | 178 | 189 | ASCHEQYFDHYI. | HHHHTTSTTSEE. | aaaaaaapvxbb. |
1h65_A_108 | 1h65 | A | 109 | 120 | NIIKSFLLDKTI. | HHHHHHTTT-EE. | aaaaaaapvbbx. |
1hjx_A_296 | 1hjx | A | 297 | 309 | YEICDFLRGATVH | HHHHHHTTT-EEE | aaaaaaaxvxbbb |
1i8t_A_194 | 1i8t | A | 196 | 208 | KLIEKMLEGVDVK | HHHHHHHTTSEEE | aaaaaaapvbxbb |
1j54_A_79 | 1j54 | A | 84 | 96 | DEFMDYIRGAELV | HHHHHHHTTSEEE | aaaaaaapvxxxb |
1juv_A_34 | 1juv | A | 38 | 50 | QNFKARTEGTIMI | HHHHHHHTTSEEE | aaaaaaapvbxxb |
1l4u_A_86 | 1l4u | A | 86 | 98 | PGVRAALAGHTVV | HHHHHHHTTS-EE | aaaaaaapgxxbx |
1qzo_A_275 | 1qzo | A | 276 | 288 | YEICDFLHGATTH | HHHHHHTTT-EEE | aaaaaaaxvbbxb |
1ra9_*_25 | 1ra9 | - | 29 | 41 | AWFKRNTLDKPVI | HHHHHHHTTS-EE | aaaaaaaplbxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h32_A_177 | 1h32 | A | HA2HEC BINDING SITE FOR CHAIN A | C - 180 |
1h32_A_177 | 1h32 | A | HA2HEC BINDING SITE FOR CHAIN A | H - 181 |
Clusters included in this Subclass |
CLUSTER: HE.3.75 |
CLUSTER: HE.4.146 |
CLUSTER: HE.4.196 |
CLUSTER: HE.5.156 |
CLUSTER: HE.5.205 |