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PDB code:

Information on SUBCLASS 4.5.1

Subclass Accession number: 5620 Subclass: 4.5.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates:

Number of loops: 37 Average sequence ID (%) : 15.0 +/- 16.5 Average RMSD (Å) : 0.759 +/- 0.269 Consensus geometry d (Å): 13 delta (°): 135-180 theta (°): 135-180 rho (°): 225-270

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
16pk_*_93	16pk	-	97	110	KRLSELLLRPVTFA	HHHHHHHTS--EEE	aaaaaaavbxbxxb
1a3c_*_41	1a3c	-	52	65	ERIEQIEGNPVTVG	HHHHHHHSS--EEE	aaaaaaavbpbxbb
1bol_A_163	1bol	A	168	181	SAIESYFGAKAKID	HHHHHHHSS--EEE	aaaaaaavbxbbbb
1dix_A_142	1dix	A	147	160	NAIKSAIGYTPWIQ	HHHHHHHSS--EEE	aaaaaaavbxxbbb
1dj0_A_35	1dj0	A	41	54	KALSQVANEPITVF	HHHHHHHTS---EE	aaaaaaavbwbbbb
1fuq_A_242	1fuq	A	248	260	DELAVITCAPFVT.	HHHHHHHTS--EE.	aaaaaaavbwxbx.
1fy7_A_316	1fy7	A	325	337	YELSKKENKVGSP.	HHHHHHTT--BEE.	aaaaaaavbxbbx.
1g61_A_2078	1g61	A	2085	2098	KNFLKENNLDLNVE	HHHHHHTT---EEE	aaaaaaalbbbxxb
1hdi_A_78	1hdi	A	82	94	AELKSALGKAVLF.	HHHHHHHTS--EE.	aaaaaaalbpbxx.
1hsl_A_29	1hsl	A	35	48	KELCKRINTQCTFV	HHHHHHTT---EEE	aaaaaaalbbxbxx
1iq4_A_47	1iq4	A	55	68	EELTLIAGQRPVVT	HHHHHHHSS--EEE	aaaaaaavbxxbxx
1iyb_A_141	1iyb	A	146	159	NAIRSAIGYAPGIE	HHHHHHHSS--EEE	aaaaaaavbxxbbb
1j3u_A_240	1j3u	A	248	260	EHLAKFSGHPLRS.	HHHHHHH-S--EE.	aaaaaaavbwxbx.
1jj2_D_38	1jj2	D	39	51	DILGEITGQMPVR.	HHHHHHHSS--EE.	aaaaaaagbpxbp.
1jx4_A_118	1jx4	A	130	143	NKILEKEKITVTVG	HHHHHHH---EEEE	aaaaaaalbxbbbb
1jy5_A_151	1jy5	A	156	169	SAIQSALRVTPVVK	HHHHHHHSS--EEE	aaaaaaavbxxbbb
1kfw_A_210	1kfw	A	226	239	DAYGSTNNKKYVLS	HHHHHHTT---EEE	aaaaaaalbbxbbb
1m55_A_50	1m55	A	65	78	YEWNKFSKQESKFF	HHHHHHHTS---EE	aaaaaaalbxpxbb
1mji_A_50	1mji	A	58	71	QELALITGQKPAVT	HHHHHHHTS--EEE	aaaaaaavbxxbxx
1mu2_A_363	1mu2	A	376	389	KEALVIWGRIPKFH	HHHHHHHSS--EEE	aaaaaaavbxxxxb
1nhp_*_343	1nhp	-	343	356	EVMAQKLGKETKAV	HHHHHHHT---EEE	aaaaaaavbxbbbb
1nmo_A_139	1nmo	A	144	157	SWIEARLGRKPLWC	HHHHHHHTS--EEE	aaaaaaavbxxxbb
1p5h_A_169	1p5h	A	184	197	LEMRHKTGRGQKVA	HHHHHHHS---EEE	aaaaaaavbxbxbb
1p8x_A_585	1p8x	A	592	605	QELLRVLRAQPVQV	HHHHHHTT---EEE	aaaaaaalbxxxxb
1php_*_74	1php	-	78	90	KRLGELLERPVAK.	HHHHHHHTS--EE.	aaaaaaavbxbxb.
1pie_A_363	1pie	A	372	385	QVYEEVVGYPASFY	HHHHHHHSS--EEE	aaaaaaavbbxbbb
1q7e_A_178	1q7e	A	186	198	LLHREKTGRGQRV.	HHHHHHHS---EE.	aaaaaaavbxbxb.
1qpg_*_77	1qpg	-	81	94	KELQSLLGKDVTFL	HHHHHHHTS--EEE	aaaaaaavbxbxbb
1qq9_A_176	1qq9	A	183	195	KNYFAGLNVPTEI.	HHHHHHHT---EE.	aaaaaaavbxbbx.
1qup_A_54	1qup	A	58	71	INTLRNCGKDAIIR	HHHHHHTT---EEE	aaaaaaavbxxbpb
1s9r_A_315	1s9r	A	317	330	GLLQSIINKKPVLI	HHHHHHHSS--EEE	aaaaaaavbxxbbb
1uca_A_132	1uca	A	137	150	GFLKAKFGKFPGLR	HHHHHHHSS--EEE	aaaaaaavbxxbbb
1udb_*_40	1udb	-	42	55	PVIERLGGKHPTFV	HHHHHHHTS--EEE	aaaaaaavbxxxbb
1vdk_A_242	1vdk	A	248	260	KYLAEETGLPFRV.	HHHHHHHSS--EE.	aaaaaaavbwxbx.
1vjd_A_78	1vjd	A	82	94	VELKSLLGKDVLF.	HHHHHHHSS--EE.	aaaaaaavbxbxb.
1vpe_*_74	1vpe	-	78	91	KRLSELLGKEVKFV	HHHHHHHTS--EEE	aaaaaaavbpbxbb
1vrt_A_364	1vrt	A	377	390	TESIVIWGKTPKFK	HHHHHHHSS--EEE	aaaaaaavbxxxxb

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1a3c_*_41	1a3c	*	SMSAMARIUM (III) ION	R - 49
1fy7_A_316	1fy7	A	COACOENZYME A	Y - 316
1fy7_A_316	1fy7	A	COACOENZYME A	G - 317
1fy7_A_316	1fy7	A	COACOENZYME A	K - 318
1fy7_A_316	1fy7	A	COACOENZYME A	L - 319
1fy7_A_316	1fy7	A	COACOENZYME A	L - 320
1jx4_A_118	1jx4	A	MSESELENOMETHIONINE	Y - 118
1jx4_A_118	1jx4	A	MSESELENOMETHIONINE	S - 145
1kfw_A_210	1kfw	A	GOLGLYCEROL	F - 241
1m55_A_50	1m55	A	ZNZINC ION	Q - 73
1m55_A_50	1m55	A	ZNZINC ION	E - 74
1m55_A_50	1m55	A	ZNZINC ION	S - 75
1m55_A_50	1m55	A	ZNZINC ION	K - 76
1m55_A_50	1m55	A	ZNZINC ION	E - 82
1mji_A_50	1mji	A	MSESELENOMETHIONINE	L - 60
1mji_A_50	1mji	A	MSESELENOMETHIONINE	I - 63
1mu2_A_363	1mu2	A	GOLGLYCEROL	K - 376
1mu2_A_363	1mu2	A	GOLGLYCEROL	I - 381
1nmo_A_139	1nmo	A	MSESELENOMETHIONINE	E - 141
1p8x_A_585	1p8x	A	CACALCIUM ION	E - 587
1q7e_A_178	1q7e	A	MSESELENOMETHIONINE	L - 178
1q7e_A_178	1q7e	A	MSESELENOMETHIONINE	L - 179
1q7e_A_178	1q7e	A	MSESELENOMETHIONINE	I - 180
1q7e_A_178	1q7e	A	MSESELENOMETHIONINE	G - 181
1q7e_A_178	1q7e	A	MSESELENOMETHIONINE	V - 198
1qup_A_54	1qup	A	MSESELENOMETHIONINE	I - 57
1qup_A_54	1qup	A	MSESELENOMETHIONINE	L - 61

Clusters included in this Subclass

CLUSTER: HE.3.26

CLUSTER: HE.4.22

CLUSTER: HE.5.13

CLUSTER: HE.6.296

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