Home

Classification

Query

Statistics

Contact

Links

Help

PDB code:

Information on SUBCLASS 5.1.2

Subclass Accession number: 5741 Subclass: 5.1.2 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates:

Number of loops: 9 Average sequence ID (%) : 14.3 +/- 19.9 Average RMSD (Å) : 0.822 +/- 0.259 Consensus geometry d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1ewq_A_645	1ewq	A	648	660	LILKEATENSLVL	HHHHH--TTEEEE	aaaaaxbaaxbbb
1g5t_A_140	1g5t	A	145	157	SALNARPGHQTVI	HHHHTS-TT-EEE	aaaaaxwaaxxbb
1g64_B_340	1g64	B	345	357	SALNARPGHQTVI	HHHHHS-TT-EEE	aaaaappaNxbbb
1jpz_A_109	1jpz	A	128	140	QKWERLNADEHIE	HHHHT--TT--EE	aaaaaxxaabbbx
1jql_B_93	1jql	B	99	111	TLTGLLHDDLLLI	HHHHH--SS--EE	aaaaapbaaxxxb
1m2o_A_134	1m2o	A	146	158	TSLSLLPPNALIG	HHHHTS-TT-EEE	aaaaaxxaapxbb
1q1a_A_233	1q1a	A	233	245	SLPEEIPRKVKRV	HHHHHS-TTSEEE	aaaaaxwaabxbb
1qo0_D_65	1qo0	D	71	83	ALLAAGTPRTTLV	HHHHHS-TT-EEE	aaaaaxxaaxxbb
2trc_P_120	2trc	P	125	137	ETIEKEQKVTTIV	HHHHHS-TT-EEE	aaaaaxpaaxxbb

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1ewq_A_645	1ewq	A	MSESELENOMETHIONINE	E - 645
1ewq_A_645	1ewq	A	MSESELENOMETHIONINE	V - 646
1ewq_A_645	1ewq	A	MSESELENOMETHIONINE	A - 647
1ewq_A_645	1ewq	A	MSESELENOMETHIONINE	L - 648
1ewq_A_645	1ewq	A	EDO1,2-ETHANEDIOL	E - 652
1ewq_A_645	1ewq	A	MSESELENOMETHIONINE	L - 658
1g5t_A_140	1g5t	A	MGMAGNESIUM ION	T - 159
1g5t_A_140	1g5t	A	ATPADENOSINE-5'-TRIPHOSPHATE	T - 159
1g64_B_340	1g64	B	MGMAGNESIUM ION	T - 359
1g64_B_340	1g64	B	ATPADENOSINE-5'-TRIPHOSPHATE	T - 359
1q1a_A_233	1q1a	A	OAD2'-O-ACETYL ADENOSINE-5-DIPHOSPHORIBOSE	C - 247
2trc_P_120	2trc	P	MSESELENOMETHIONINE	T - 134
2trc_P_120	2trc	P	MSESELENOMETHIONINE	T - 135

Clusters included in this Subclass

CLUSTER: HE.5.138

CLUSTER: HE.6.62

For any comment or web-related incidence, send an email to the webmaster.