Information on SUBCLASS 4.3.2 |
Subclass Accession number: 6271
Subclass: 4.3.2 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 33 Average sequence ID (%) : 12.6 +/- 15.1 Average RMSD (Å) : 0.579 +/- 0.286 Consensus geometry
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Consensus Sequence: | XXXpcXXX |
(φψ)-conformation: | bbaagppb |
Pattern: | x | x | [dgnqst] | [adegkqrst] | [dehknqrst] | [degnq] | x | x | x |
Conservation: | -1.107 | -0.101 | 0.712 | -0.181 | 1.408 | 1.533 | -0.485 | -1.086 | -0.692 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a8d_*_391 | 1a8d | - | 394 | 402 | LYDDKNASL | EE-SSS-EE | xbxaavxxa |
1ahs_A_194 | 1ahs | A | 194 | 202 | FCDPQGASL | EE-TTS-EE | bbxaavxxb |
1ava_A_97 | 1ava | A | 97 | 105 | HKDGRGIYC | EE-TTS-EE | bxxaavxxa |
1df7_A_143 | 1df7 | A | 143 | 151 | RFSRSGLRY | EE-TTS-EE | bbxaavxxb |
1ece_A_12 | 1ece | A | 13 | 21 | ILDANNVPV | EE-TTS-EE | bbxaavxwb |
1elu_A_254 | 1elu | A | 255 | 263 | TYGAKGEPT | EE-TTS-EE | bbxaavxwa |
1fp3_A_361 | 1fp3 | A | 361 | 369 | YLNREGKVA | EE-TTS-EE | bbxaavxxa |
1goi_A_46 | 1goi | A | 53 | 61 | DINSNLECA | EE-TTSSEE | bbxaavbxb |
1hzt_A_35 | 1hzt | A | 39 | 47 | LFNAKGQLL | EE-TT--EE | bbxaavxxx |
1i2k_A_161 | 1i2k | A | 164 | 172 | VLDSEGWVT | EEBTTSBEE | bbxaavxpa |
1j7g_A_55 | 1j7g | A | 55 | 63 | FSDENDKMN | EE-TTS-EE | bxxaavxxa |
1jke_A_55 | 1jke | A | 55 | 63 | FSDAEGKMN | EE-TTS-EE | bxxaagbxa |
1jvw_A_88 | 1jvw | A | 94 | 102 | GRLRDGTVF | EE-TTS-EE | bbxaavpxa |
1jy5_A_174 | 1jy5 | A | 181 | 189 | CFDKTLQLQ | EE-TTS-EE | bbxaavxpb |
1jyk_A_137 | 1jyk | A | 139 | 147 | VYGDDYKVQ | EE-TT-BEE | bbbaavxxa |
1khb_A_383 | 1khb | A | 383 | 391 | ITSWKNKEW | EE-TTSSEE | bbxaavbxb |
1l6x_A_397 | 1l6x | A | 397 | 405 | VLDSDGSFF | EE-TTS-EE | bxxaavxbb |
1nlb_H_88 | 1nlb | H | 94 | 102 | RFLLRQYFD | EE-TTSSEE | xbbaavbxa |
1oac_A_585 | 1oac | A | 593 | 601 | KENRMGNPV | EE-TTS-EE | bbxaavbpx |
1oe4_A_179 | 1oe4 | A | 180 | 188 | FMNHSGKNL | EE-TT--EE | bbxaavxxb |
1p3c_A_174 | 1p3c | A | 175 | 183 | MLDQNQQIV | EE-TTS-EE | xbxaavxxa |
1q0x_L_165 | 1q0x | L | 165 | 173 | SKQSNNKYM | EE-TTS-EE | bxxaavxbb |
1q1u_A_11 | 1q1u | A | 15 | 23 | LFSQQGYFL | EEETTTEEE | bxxaavbxx |
1q2y_A_127 | 1q2y | A | 127 | 134 | .FLDAGIPH | .EESSSSEE | .bxaavbwb |
1qkz_H_169 | 1qkz | H | 169 | 176 | .VLQSDLYT | .EE-SSSEE | .bxaavbbb |
1qme_A_79 | 1qme | A | 79 | 87 | IYDRNGVPI | EE-TTS-EE | bbxaavxwa |
1qng_A_45 | 1qng | A | 45 | 53 | KIGSRGKNL | EE-TTSSEE | bbxaavxxp |
1rku_A_109 | 1rku | A | 115 | 123 | EIDDSDRVV | EE-TTS-EE | bbxaavxxa |
1rzt_A_537 | 1rzt | A | 537 | 545 | VRNTHGCKV | EE-TT--EE | xbbaalbpa |
1s9v_B_128 | 1s9v | B | 130 | 138 | RWFRNDQEE | EEESSSSEE | bbbaagbxb |
1umh_A_219 | 1umh | A | 227 | 235 | LLSENEDVL | EE-TT--EE | bbxaavxxa |
2nap_A_250 | 2nap | A | 253 | 261 | FMDAEGKPS | EE-TTS-EE | bbxaavxpb |
3psg_*_196 | 3psg | - | 196 | 204 | SITMDGETI | EEESSSSEE | bbbaavxxa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1a8d_*_391 | 1a8d | * | AUGOLD ION | Q - 391 |
1a8d_*_391 | 1a8d | * | AUGOLD ION | L - 404 |
1df7_A_143 | 1df7 | A | GOLGLYCEROL | R - 143 |
1df7_A_143 | 1df7 | A | GOLGLYCEROL | R - 152 |
1df7_A_143 | 1df7 | A | GOLGLYCEROL | L - 153 |
1df7_A_143 | 1df7 | A | GOLGLYCEROL | Y - 154 |
1df7_A_143 | 1df7 | A | GOLGLYCEROL | Y - 156 |
1goi_A_46 | 1goi | A | GOLGLYCEROL | F - 51 |
1i2k_A_161 | 1i2k | A | PLPPYRIDOXAL-5'-PHOSPHATE | E - 173 |
1oac_A_585 | 1oac | A | CACALCIUM ION | L - 588 |
1rku_A_109 | 1rku | A | EDO1,2-ETHANEDIOL | L - 109 |
1rku_A_109 | 1rku | A | EDO1,2-ETHANEDIOL | K - 113 |
Clusters included in this Subclass |
CLUSTER: HA.4.181 |
CLUSTER: HA.4.49 |
CLUSTER: HA.5.37 |
CLUSTER: HA.5.71 |
CLUSTER: HA.6.121 |
CLUSTER: HA.6.29 |