Information on SUBCLASS 5.14.1 |
Subclass Accession number: 6392
Subclass: 5.14.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 14 Average sequence ID (%) : 20.7 +/- 18.8 Average RMSD (Å) : 0.450 +/- 0.376 Consensus geometry
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Consensus Sequence: | XXGXphpph |
(φψ)-conformation: | bbeaalabb |
Pattern: | x | x | x | x | [G] | x | [deknrsty] | [cgn] | [DEGNST] | [dehqrtwy] | [acfilptv] |
Conservation: | -1.000 | -1.000 | -0.346 | -0.368 | 2.429 | -0.683 | -0.486 | 0.594 | 0.105 | -0.577 | -0.668 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cvu_A_64 | 1cvu | A | 64 | 72 | ..FYGENCTTP | ..EETTTT-EE | ..bbeaalaxx |
1dan_L_76 | 1dan | L | 76 | 84 | ..FEGRNCETH | ..EESTTS-EE | ..bbeaalaxx |
1ezv_E_167 | 1ezv | E | 167 | 177 | IGEAGDFGGWF | EET-STTSSEE | xxlbeaavFbb |
1fiq_C_645 | 1fiq | C | 645 | 653 | ..ETGLFNDET | ..EESTTS-EE | ..bbeaalabb |
1g1s_A_148 | 1g1s | A | 148 | 156 | ..FYGPECEYV | ..EESTTS-EE | ..bbeaalabx |
1g1t_A_148 | 1g1t | A | 148 | 156 | ..FSGLKCEQI | ..EESTTS-EE | ..bbeaalabx |
1hwl_A_777 | 1hwl | A | 781 | 791 | MEASGPTNEDL | EEEETTTT-EE | bbxbeaavaxx |
1k32_A_92 | 1k32 | A | 96 | 106 | RVMRGSSLNTA | EEEESTT--EE | bbbbMaalabb |
1klo_*_149 | 1klo | - | 149 | 157 | ..VSGRDCGTC | ..EESTT--EE | ..bbeaalabx |
1klo_*_37 | 1klo | - | 37 | 45 | ..TAGKRCELC | ..EESTTS-EE | ..bbeaalabx |
1klo_*_94 | 1klo | - | 94 | 102 | ..TAGFYCDRC | ..EETTTT-EE | ..xbeaalabb |
1lk9_A_45 | 1lk9 | A | 45 | 53 | ..YTGPDCSEK | ..EESTTS-EE | ..bbeaalaxx |
1mox_C_38 | 1mox | C | 38 | 46 | ..YVGARCEHA | ..EESTTS-EE | ..bbeaalabx |
1xkb_A_76 | 1xkb | A | 76 | 84 | ..FEGKNCELF | ..EETTTT-EE | ..bbeaalabx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1cvu_A_64 | 1cvu | A | NAGN-ACETYL-D-GLUCOSAMINE | E - 67 |
1cvu_A_64 | 1cvu | A | NAGN-ACETYL-D-GLUCOSAMINE | N - 68 |
1cvu_A_64 | 1cvu | A | NAGN-ACETYL-D-GLUCOSAMINE | T - 70 |
1ezv_E_167 | 1ezv | E | FESFE2/S2 (INORGANIC) CLUSTER | C - 178 |
1g1s_A_148 | 1g1s | A | MPD2-METHYL-2,4-PENTANEDIOL | Y - 149 |
1g1s_A_148 | 1g1s | A | MPD2-METHYL-2,4-PENTANEDIOL | P - 151 |
1g1s_A_148 | 1g1s | A | MPD2-METHYL-2,4-PENTANEDIOL | E - 152 |
1mox_C_38 | 1mox | C | CDCADMIUM ION | Y - 38 |
1mox_C_38 | 1mox | C | PTPLATINUM (II) ION | V - 39 |
1mox_C_38 | 1mox | C | NAGN-ACETYL-D-GLUCOSAMINE | R - 42 |
Clusters included in this Subclass |
CLUSTER: HA.6.26 |