Information on SUBCLASS 5.1.2 |
Subclass Accession number: 697
Subclass: 5.1.2 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 37 Average sequence ID (%) : 15.6 +/- 16.5 Average RMSD (Å) : 0.532 +/- 0.178 Consensus geometry
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Consensus Sequence: | hXpXpcpXX |
(φψ)-conformation: | bbpaagpbb |
Pattern: | [afgiltv] | x | [adegknst] | [dehknpqrst] | [adegknqrst] | [EGKNR] | [adeknqrst] | x | x | [acfgilmvwy] |
Conservation: | -0.475 | -0.486 | 0.255 | -0.182 | -0.055 | 2.728 | -0.144 | -0.431 | -0.432 | -0.777 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aol_*_10 | 1aol | - | 17 | 26 | VTNGDRETVW | EE-TTS-EEE | bbxaavxxab |
1buc_A_143 | 1buc | A | 145 | 154 | TKNDDGTYTL | EE-TTS-EEE | xxbaavbbbx |
1c8u_A_258 | 1c8u | A | 265 | 274 | FYTQDGVLVA | EEETT--EEE | bbxaavxxab |
1ckq_A_94 | 1ckq | A | 97 | 106 | VKDDYGEWRV | EE-TTS-EEE | bxxaavxxbx |
1cv8_*_119 | 1cv8 | - | 128 | 137 | AKLNNGQEVI | EEETTS-EEE | bbxaavxbbb |
1ex0_A_547 | 1ex0 | A | 557 | 566 | ITFYTGVPKA | EE-TTS-EEE | xbxaavxxab |
1hc7_A_210 | 1hc7 | A | 216 | 225 | ALMKDGKALQ | EE-TTS-EEE | bbxaavbxbx |
1hnf_*_79 | 1hnf | - | 85 | 94 | IYDTKGKNVL | EEETTS-EEE | bbxaavxxab |
1i31_A_172 | 1i31 | A | 184 | 193 | LMSPQGQVLS | EE-SS--EEE | bbxaagxxab |
1i4u_A_63 | 1i4u | A | 69 | 78 | GIAYDGNLLK | EEETTS-EEE | ebxaavxpbb |
1iq6_A_108 | 1iq6 | A | 115 | 124 | IFTQGGALAV | EE-TTS-EEE | bbxaavxxab |
1iyb_A_157 | 1iyb | A | 161 | 170 | NVDESGNSQL | EE-TT--EEE | bbxaavxxbx |
1j9j_A_182 | 1j9j | A | 190 | 199 | RVSPFGEKYY | EE-TTS-EEE | bbxaavxxbb |
1jiw_I_67 | 1jiw | I | 70 | 79 | LLERGGLTLM | EE-TTS-EEE | xbxaagxxab |
1jov_A_107 | 1jov | A | 114 | 123 | LFSDLNIIEA | EE-TTS-EEE | bbxaavbpab |
1kk8_A_244 | 1kk8 | A | 250 | 259 | HFGPTGKIAG | EE-TTSSEEE | xbxaavbpae |
1l6m_A_53 | 1l6m | A | 57 | 66 | ELKEDKSYNV | EE-TTS-EEE | aexaavxbxb |
1lo7_A_91 | 1lo7 | A | 100 | 109 | RTTPGGDVQL | EE-TTS-EEE | bbxaavxxxx |
1lrz_A_39 | 1lrz | A | 45 | 54 | IKNNNNEVIA | EE-TTS-EEE | bbxaavxxab |
1m8a_A_36 | 1m8a | A | 39 | 48 | FHTKKKLSVC | EEETT--EEE | xbbaavxbbp |
1mkm_A_194 | 1mkm | A | 201 | 210 | IFDHNGYPVA | EE-TTS-EEE | bbxaavxwab |
1n62_B_314 | 1n62 | B | 321 | 330 | AATKDGKILA | EE-TT--EEE | bbxaavxxab |
1n9l_A_96 | 1n9l | A | 106 | 115 | IKTPDGRVSK | EE-TTS-EEE | bbxaavxxab |
1ne9_A_40 | 1ne9 | A | 46 | 55 | LEDDQGAIIA | EE-TTS-EEE | bbxaavxxab |
1nep_A_104 | 1nep | A | 111 | 120 | LTDDKNQRFF | EE-TTS-EEE | bbbaavxxab |
1ojj_A_266 | 1ojj | A | 273 | 282 | LANRRGKLEK | EE-TTS-EEE | xbxaavxxab |
1q4t_A_122 | 1q4t | A | 129 | 138 | LRDDAGRLCA | EE-TT--EEE | bbxaavxxab |
1q6h_A_141 | 1q6h | A | 148 | 157 | GTLIDGKEFD | EEETTS-EEE | bbxaagxxab |
1r17_A_349 | 1r17 | A | 349 | 358 | IKDNSGEIIA | EEETT--EEE | xbxaagxxab |
1s5u_A_89 | 1s5u | A | 96 | 105 | IVNAENTLLN | EE-TT--EEE | bbxaavxxab |
1s68_A_115 | 1s68 | A | 123 | 132 | VTTESGDVTY | EEETT--EEE | bbxaavxbbx |
1ule_A_37 | 1ule | A | 41 | 50 | FLSAGENILL | EE-TT--EEE | bbxaavxxab |
1uol_A_251 | 1uol | A | 257 | 266 | LEDSSGNLLG | EE-TTS-EEE | xbxaavxxab |
1vh5_A_111 | 1vh5 | A | 118 | 127 | IFDEKGRLCC | EE-TTS-EEE | bbxaavxxab |
1vhs_A_52 | 1vhs | A | 55 | 64 | AEDENGNVAA | EE-TTS-EEE | bbxaavxxab |
2acy_*_36 | 2acy | - | 40 | 49 | QNTDQGTVQG | EE-TTS-EEE | bxbaavbbbe |
2sak_*_24 | 2sak | - | 31 | 40 | GVDSKGNELL | EE-TT--EEE | xbxaavxxab |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1cv8_*_119 | 1cv8 | * | NULCATALYTIC TRIAD. | H - 120 |
1uol_A_251 | 1uol | A | MUAMUTATION SITE FOR CHAIN A | D - 268 |
Clusters included in this Subclass |
CLUSTER: HA.4.184 |
CLUSTER: HA.4.23 |
CLUSTER: HA.5.107 |
CLUSTER: HA.5.121 |
CLUSTER: HA.5.134 |
CLUSTER: HA.5.24 |
CLUSTER: HA.6.10 |