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Information on SUBCLASS 5.1.2
Subclass Accession number: 697
Subclass: 5.1.2 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 37

Average sequence ID (%) : 15.6 +/- 16.5
Average RMSD (Å) : 0.532 +/- 0.178

Consensus geometry
d (Å): 9 delta (°): 135-180 theta (°): 90-135 rho (°): 270-315
Consensus Sequence: hXpXpcpXX
(φψ)-conformation: bbpaagpbb
Pattern: [afgiltv]x[adegknst][dehknpqrst][adegknqrst][EGKNR][adeknqrst]xx[acfgilmvwy]
Conservation:-0.475-0.4860.255-0.182-0.0552.728-0.144-0.431-0.432-0.777
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aol_*_101aol   -1726VTNGDRETVWEE-TTS-EEEbbxaavxxab
1buc_A_1431buc   A145154TKNDDGTYTLEE-TTS-EEExxbaavbbbx
1c8u_A_2581c8u   A265274FYTQDGVLVAEEETT--EEEbbxaavxxab
1ckq_A_941ckq   A97106VKDDYGEWRVEE-TTS-EEEbxxaavxxbx
1cv8_*_1191cv8   -128137AKLNNGQEVIEEETTS-EEEbbxaavxbbb
1ex0_A_5471ex0   A557566ITFYTGVPKAEE-TTS-EEExbxaavxxab
1hc7_A_2101hc7   A216225ALMKDGKALQEE-TTS-EEEbbxaavbxbx
1hnf_*_791hnf   -8594IYDTKGKNVLEEETTS-EEEbbxaavxxab
1i31_A_1721i31   A184193LMSPQGQVLSEE-SS--EEEbbxaagxxab
1i4u_A_631i4u   A6978GIAYDGNLLKEEETTS-EEEebxaavxpbb
1iq6_A_1081iq6   A115124IFTQGGALAVEE-TTS-EEEbbxaavxxab
1iyb_A_1571iyb   A161170NVDESGNSQLEE-TT--EEEbbxaavxxbx
1j9j_A_1821j9j   A190199RVSPFGEKYYEE-TTS-EEEbbxaavxxbb
1jiw_I_671jiw   I7079LLERGGLTLMEE-TTS-EEExbxaagxxab
1jov_A_1071jov   A114123LFSDLNIIEAEE-TTS-EEEbbxaavbpab
1kk8_A_2441kk8   A250259HFGPTGKIAGEE-TTSSEEExbxaavbpae
1l6m_A_531l6m   A5766ELKEDKSYNVEE-TTS-EEEaexaavxbxb
1lo7_A_911lo7   A100109RTTPGGDVQLEE-TTS-EEEbbxaavxxxx
1lrz_A_391lrz   A4554IKNNNNEVIAEE-TTS-EEEbbxaavxxab
1m8a_A_361m8a   A3948FHTKKKLSVCEEETT--EEExbbaavxbbp
1mkm_A_1941mkm   A201210IFDHNGYPVAEE-TTS-EEEbbxaavxwab
1n62_B_3141n62   B321330AATKDGKILAEE-TT--EEEbbxaavxxab
1n9l_A_961n9l   A106115IKTPDGRVSKEE-TTS-EEEbbxaavxxab
1ne9_A_401ne9   A4655LEDDQGAIIAEE-TTS-EEEbbxaavxxab
1nep_A_1041nep   A111120LTDDKNQRFFEE-TTS-EEEbbbaavxxab
1ojj_A_2661ojj   A273282LANRRGKLEKEE-TTS-EEExbxaavxxab
1q4t_A_1221q4t   A129138LRDDAGRLCAEE-TT--EEEbbxaavxxab
1q6h_A_1411q6h   A148157GTLIDGKEFDEEETTS-EEEbbxaagxxab
1r17_A_3491r17   A349358IKDNSGEIIAEEETT--EEExbxaagxxab
1s5u_A_891s5u   A96105IVNAENTLLNEE-TT--EEEbbxaavxxab
1s68_A_1151s68   A123132VTTESGDVTYEEETT--EEEbbxaavxbbx
1ule_A_371ule   A4150FLSAGENILLEE-TT--EEEbbxaavxxab
1uol_A_2511uol   A257266LEDSSGNLLGEE-TTS-EEExbxaavxxab
1vh5_A_1111vh5   A118127IFDEKGRLCCEE-TTS-EEEbbxaavxxab
1vhs_A_521vhs   A5564AEDENGNVAAEE-TTS-EEEbbxaavxxab
2acy_*_362acy   -4049QNTDQGTVQGEE-TTS-EEEbxbaavbbbe
2sak_*_242sak   -3140GVDSKGNELLEE-TT--EEExbxaavxxab
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aol_*_101aol   *     NAGN-ACETYL-D-GLUCOSAMINE N - 12
1aol_*_101aol   *     NAGN-ACETYL-D-GLUCOSAMINE I - 13
1aol_*_101aol   *     NAGN-ACETYL-D-GLUCOSAMINE T - 14
1aol_*_101aol   *     NAGN-ACETYL-D-GLUCOSAMINE W - 26
1aol_*_101aol   *     NAGN-ACETYL-D-GLUCOSAMINE S - 29
1aol_*_101aol   *     NAGN-ACETYL-D-GLUCOSAMINE N - 31
1buc_A_1431buc   A     FADFLAVIN-ADENINE DINUCLEOTIDE I - 159
1buc_A_1431buc   A     FADFLAVIN-ADENINE DINUCLEOTIDE F - 160
1buc_A_1431buc   A     CAAACETOACETYL-COENZYME A F - 160
1buc_A_1431buc   A     FADFLAVIN-ADENINE DINUCLEOTIDE I - 161
1buc_A_1431buc   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 162
1buc_A_1431buc   A     CAAACETOACETYL-COENZYME A T - 162
1c8u_A_2581c8u   A     LDALAURYL DIMETHYLAMINE-N-OXIDE Q - 278
1cv8_*_1191cv8   *     E64N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE G - 119
1cv8_*_1191cv8   *     E64N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE H - 120
1cv8_*_1191cv8   *     E64N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE A - 121
1i4u_A_631i4u   A     MPD2-METHYL-2,4-PENTANEDIOL S - 67
1i4u_A_631i4u   A     MPD2-METHYL-2,4-PENTANEDIOL R - 79
1iyb_A_1571iyb   A     5GPGUANOSINE-5'-MONOPHOSPHATE Y - 171
1iyb_A_1571iyb   A     5GPGUANOSINE-5'-MONOPHOSPHATE Q - 172
1l6m_A_531l6m   A     DBH2,3-DIHYDROXY-BENZOIC ACID T - 54
1l6m_A_531l6m   A     DBH2,3-DIHYDROXY-BENZOIC ACID S - 68
1l6m_A_531l6m   A     DBH2,3-DIHYDROXY-BENZOIC ACID L - 70
1lo7_A_911lo7   A     4CO4-HYDROXYPHENACYL COENZYME A S - 91
1lo7_A_911lo7   A     4CO4-HYDROXYPHENACYL COENZYME A F - 92
1lo7_A_911lo7   A     EGLETHYLENE GLYCOL R - 95
1lo7_A_911lo7   A     EGLETHYLENE GLYCOL R - 112
1lo7_A_911lo7   A     EGLETHYLENE GLYCOL A - 113
1lo7_A_911lo7   A     EGLETHYLENE GLYCOL D - 114
1lo7_A_911lo7   A     4CO4-HYDROXYPHENACYL COENZYME A I - 116
1lo7_A_911lo7   A     4CO4-HYDROXYPHENACYL COENZYME A R - 117
1lo7_A_911lo7   A     4CO4-HYDROXYPHENACYL COENZYME A V - 118
1lo7_A_911lo7   A     4CO4-HYDROXYPHENACYL COENZYME A A - 120
1m8a_A_361m8a   A     IOH2-PROPANOL, ISOPROPANOL I - 37
1m8a_A_361m8a   A     IOH2-PROPANOL, ISOPROPANOL I - 38
1m8a_A_361m8a   A     IOH2-PROPANOL, ISOPROPANOL F - 39
1m8a_A_361m8a   A     IOH2-PROPANOL, ISOPROPANOL H - 40
1m8a_A_361m8a   A     IOH2-PROPANOL, ISOPROPANOL T - 41
1m8a_A_361m8a   A     IOH2-PROPANOL, ISOPROPANOL K - 44
1m8a_A_361m8a   A     IOH2-PROPANOL, ISOPROPANOL S - 46
1m8a_A_361m8a   A     IOH2-PROPANOL, ISOPROPANOL V - 47
1m8a_A_361m8a   A     IOH2-PROPANOL, ISOPROPANOL C - 48
1mkm_A_1941mkm   A     ZNZINC ION M - 195
1mkm_A_1941mkm   A     ZNZINC ION C - 196
1mkm_A_1941mkm   A     ZNZINC ION S - 213
1mkm_A_1941mkm   A     ZNZINC ION S - 215
1n9l_A_961n9l   A     FMNFLAVIN MONONUCLEOTIDE N - 99
1n9l_A_961n9l   A     FMNFLAVIN MONONUCLEOTIDE L - 101
1n9l_A_961n9l   A     FMNFLAVIN MONONUCLEOTIDE V - 103
1n9l_A_961n9l   A     FMNFLAVIN MONONUCLEOTIDE T - 104
1n9l_A_961n9l   A     FMNFLAVIN MONONUCLEOTIDE F - 116
1n9l_A_961n9l   A     FMNFLAVIN MONONUCLEOTIDE V - 117
1n9l_A_961n9l   A     FMNFLAVIN MONONUCLEOTIDE G - 118
1n9l_A_961n9l   A     FMNFLAVIN MONONUCLEOTIDE V - 119
1n9l_A_961n9l   A     FMNFLAVIN MONONUCLEOTIDE Q - 120
1nep_A_1041nep   A     PO4PHOSPHATE ION E - 108
1nep_A_1041nep   A     PO4PHOSPHATE ION E - 110
1nep_A_1041nep   A     PO4PHOSPHATE ION R - 118
1nep_A_1041nep   A     PO4PHOSPHATE ION C - 121
1nep_A_1041nep   A     PO4PHOSPHATE ION Q - 123
1q4t_A_1221q4t   A     4CO4-HYDROXYPHENACYL COENZYME A R - 135
1q4t_A_1221q4t   A     4CO4-HYDROXYPHENACYL COENZYME A C - 137
1q4t_A_1221q4t   A     4CO4-HYDROXYPHENACYL COENZYME A A - 145
1q4t_A_1221q4t   A     4CO4-HYDROXYPHENACYL COENZYME A R - 147
1q4t_A_1221q4t   A     4CO4-HYDROXYPHENACYL COENZYME A P - 148
1s68_A_1151s68   A     AMPADENOSINE MONOPHOSPHATE F - 119
1s68_A_1151s68   A     AMPADENOSINE MONOPHOSPHATE D - 120
1ule_A_371ule   A     GALD-GALACTOSE V - 38
1ule_A_371ule   A     GALD-GALACTOSE H - 51
1ule_A_371ule   A     GALD-GALACTOSE S - 53
1ule_A_371ule   A     GALD-GALACTOSE R - 55
1ule_A_371ule   A     NAGN-ACETYL-D-GLUCOSAMINE R - 55
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1cv8_*_1191cv8   * NULCATALYTIC TRIAD.H - 120
1uol_A_2511uol   A MUAMUTATION SITE FOR CHAIN AD - 268

Clusters included in this Subclass
CLUSTER: HA.4.184
CLUSTER: HA.4.23
CLUSTER: HA.5.107
CLUSTER: HA.5.121
CLUSTER: HA.5.134
CLUSTER: HA.5.24
CLUSTER: HA.6.10