Information on SUBCLASS 3.3.1 |
Subclass Accession number: 7840
Subclass: 3.3.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 27 Average sequence ID (%) : 15.6 +/- 17.5 Average RMSD (Å) : 0.467 +/- 0.141 Consensus geometry
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Consensus Sequence: | XXXGpph |
(φψ)-conformation: | bbagabb |
Pattern: | x | [dhnstwy] | x | [egkq] | [dehknrsty] | [aeknqrst] | x | x |
Conservation: | -0.937 | -0.318 | 0.008 | 2.371 | -0.358 | -0.149 | -0.137 | -0.479 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a79_A_37 | 1a79 | A | 37 | 44 | NVEGNFLS | EE-SS-EE | bxaGabbb |
1ao0_A_30 | 1ao0 | A | 35 | 42 | ATDGEKLT | EE-SS-EE | bbagabbx |
1bqb_A_115 | 1bqb | A | 116 | 123 | AWIGDKMI | EE-SSSEE | bxagNbbb |
1e5d_A_129 | 1e5d | A | 130 | 137 | LSLGKRTV | EE-SS-EE | bxaeaxbb |
1eag_A_3 | 1eag | A | 8 | 15 | HNEQVTYA | EE-SSSEE | xxagabbb |
1f8d_A_179 | 1f8d | A | 183 | 190 | CHDGKTRM | EE-SSSEE | bxagabbb |
1gyc_A_330 | 1gyc | A | 331 | 338 | NFNGTNFF | EE-SS-EE | bbagabxb |
1gz7_A_15 | 1gz7 | A | 15 | 22 | LNAIVNEK | EE-SSSEE | bxaGabbb |
1hcb_*_56 | 1hcb | - | 60 | 67 | INVGHSFH | EE-SS-EE | bxaGabbb |
1io7_A_14 | 1io7 | A | 15 | 22 | YYDGNIWQ | EE-SS-EE | bbagabxb |
1j0h_A_519 | 1j0h | A | 524 | 531 | KTDGDETV | EE-SS-EE | bbavabbb |
1j2q_H_173 | 1j2q | H | 177 | 184 | KITEDEFY | EE-SS-EE | bbagabbb |
1jd0_A_56 | 1jd0 | A | 60 | 67 | TNNGHSVK | EE-SSSEE | bxavabbb |
1k32_A_275 | 1k32 | A | 279 | 286 | NTDGRRIL | EESSS-EE | bbavabbb |
1keq_A_56 | 1keq | A | 60 | 67 | WNTGYAFQ | EE-SSSEE | bxavabbb |
1kny_A_63 | 1kny | A | 68 | 75 | WTTGEWKV | EE-SS-EE | bbagabbb |
1kop_A_60 | 1kop | A | 62 | 69 | ENNGHTIQ | EE-SS-EE | bbavabbb |
1kqf_A_798 | 1kqf | A | 799 | 806 | QWNGSKWT | EE-SSSEE | bxagNbxb |
1llf_A_15 | 1llf | A | 15 | 22 | LNAIINEA | EE-SS-EE | bxagabbb |
1mkh_A_31 | 1mkh | A | 35 | 42 | VDLGDEVR | EE-SS-EE | bxagabbx |
1mkh_A_84 | 1mkh | A | 85 | 92 | ADDGERVA | EE-SS-EE | xbavaxbb |
1moo_A_56 | 1moo | A | 60 | 67 | LNNGAAFN | EE-SSSEE | bxavabbb |
1n7o_A_664 | 1n7o | A | 671 | 678 | FMLKDKIA | EE-SS-EE | bxaGabbx |
1npc_*_114 | 1npc | - | 115 | 122 | FWNGSQMV | EE-SSSEE | bxavabxb |
1ps9_A_9 | 1ps9 | A | 9 | 16 | LDLGFTTL | EE-SS-EE | bxagabbx |
2bat_*_180 | 2bat | - | 183 | 190 | CHDGKAWL | EE-SSSEE | bbagabxb |
2znc_*_55 | 2znc | - | 60 | 67 | KNNQHTVE | EE-SSSEE | bxavabxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gyc_A_330 | 1gyc | A | NA5NAG BINDING SITE FOR CHAIN A | N - 333 |
1gyc_A_330 | 1gyc | A | NA5NAG BINDING SITE FOR CHAIN A | T - 335 |
1gyc_A_330 | 1gyc | A | NA5NAG BINDING SITE FOR CHAIN A | N - 336 |
1gyc_A_330 | 1gyc | A | NA5NAG BINDING SITE FOR CHAIN A | F - 338 |
Clusters included in this Subclass |
CLUSTER: HA.3.13 |