Logo
Information on SUBCLASS 2.1.6
Subclass Accession number: 8192
Subclass: 2.1.6 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 12

Average sequence ID (%) : 12.4 +/- 19.5
Average RMSD (Å) : 0.758 +/- 0.193

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: ppcXXh
(φψ)-conformation: aalpbb
Pattern: x[aflpy]x[AEKQR][hknqrty][DGKNS]xx[ipvy]xx
Conservation:-0.851-0.704-0.3811.8540.0081.679-0.834-0.6220.011-0.8800.720
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a4e_A_2571a4e   A264274EAIQNGNYPSWHHHHTT---EEaaaaavxxxbb
1azs_A_5521azs   A553563YLKEHSIETFLHHHHTT---EEaaaaalxxbbb
1c30_A_5101c30   A516526LRDQYDLHPVYHHHHTT---EEaaaaavbbxbb
1dgf_A_2601dgf   A267277NAIATGKYPSWHHHHTT---EEaaaaavxxxbb
1e93_A_2391e93   A246256EAIKRGDYPRWHHHHTT---EEaaaaavxxwbb
1evl_A_4891evl   A489498LPSRLSASYV.HHHHTT--EE.aaaaalxbbx.
1g5h_D_4191g5h   D420430TTLENGLIQLRHHHHH---EEEaaaaavxbxbb
1m7s_A_2621m7s   A269279GAIKKGDFPKWHHHHTT---EEaaaaavxxxbb
1mhy_D_4041mhy   D407417WLLANGHDVYIHHHHTT---EEaaaaavbxbbb
1mty_D_4051mty   D407417WFIENNHPIYIHHHHTT---EEaaaaalbxbbb
1nyr_A_4951nyr   A495504LPERFDLTYI.HHHHTT--EE.aaaaalxbbx.
1o7q_A_1151o7q   A121131YYAKQKITVGLHHHHHT--EEEaaaaalxbbxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dgf_A_2601dgf   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE Q - 282
1g5h_D_4191g5h   D     MSESELENOMETHIONINE T - 420
1g5h_D_4191g5h   D     MSESELENOMETHIONINE G - 425
1g5h_D_4191g5h   D     MSESELENOMETHIONINE L - 426
1g5h_D_4191g5h   D     MSESELENOMETHIONINE I - 427
1g5h_D_4191g5h   D     MSESELENOMETHIONINE Q - 428
1g5h_D_4191g5h   D     MSESELENOMETHIONINE L - 429
1g5h_D_4191g5h   D     MSESELENOMETHIONINE R - 430
1g5h_D_4191g5h   D     MSESELENOMETHIONINE S - 431
1o7q_A_1151o7q   A     UDPURIDINE-5'-DIPHOSPHATE V - 133
1o7q_A_1151o7q   A     UDPURIDINE-5'-DIPHOSPHATE F - 134
1o7q_A_1151o7q   A     UDPURIDINE-5'-DIPHOSPHATE A - 135
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1o7q_A_1151o7q   A AC6UDP BINDING SITE FOR CHAIN AF - 134
1o7q_A_1151o7q   A AC6UDP BINDING SITE FOR CHAIN AA - 135

Clusters included in this Subclass
CLUSTER: HE.3.132
CLUSTER: HE.4.62
CLUSTER: HE.5.63
CLUSTER: HE.6.31