Information on SUBCLASS 2.1.6 |
Subclass Accession number: 8192
Subclass: 2.1.6 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 12 Average sequence ID (%) : 12.4 +/- 19.5 Average RMSD (Å) : 0.758 +/- 0.193 Consensus geometry
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Consensus Sequence: | ppcXXh |
(φψ)-conformation: | aalpbb |
Pattern: | x | [aflpy] | x | [AEKQR] | [hknqrty] | [DGKNS] | x | x | [ipvy] | x | x |
Conservation: | -0.851 | -0.704 | -0.381 | 1.854 | 0.008 | 1.679 | -0.834 | -0.622 | 0.011 | -0.880 | 0.720 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a4e_A_257 | 1a4e | A | 264 | 274 | EAIQNGNYPSW | HHHHTT---EE | aaaaavxxxbb |
1azs_A_552 | 1azs | A | 553 | 563 | YLKEHSIETFL | HHHHTT---EE | aaaaalxxbbb |
1c30_A_510 | 1c30 | A | 516 | 526 | LRDQYDLHPVY | HHHHTT---EE | aaaaavbbxbb |
1dgf_A_260 | 1dgf | A | 267 | 277 | NAIATGKYPSW | HHHHTT---EE | aaaaavxxxbb |
1e93_A_239 | 1e93 | A | 246 | 256 | EAIKRGDYPRW | HHHHTT---EE | aaaaavxxwbb |
1evl_A_489 | 1evl | A | 489 | 498 | LPSRLSASYV. | HHHHTT--EE. | aaaaalxbbx. |
1g5h_D_419 | 1g5h | D | 420 | 430 | TTLENGLIQLR | HHHHH---EEE | aaaaavxbxbb |
1m7s_A_262 | 1m7s | A | 269 | 279 | GAIKKGDFPKW | HHHHTT---EE | aaaaavxxxbb |
1mhy_D_404 | 1mhy | D | 407 | 417 | WLLANGHDVYI | HHHHTT---EE | aaaaavbxbbb |
1mty_D_405 | 1mty | D | 407 | 417 | WFIENNHPIYI | HHHHTT---EE | aaaaalbxbbb |
1nyr_A_495 | 1nyr | A | 495 | 504 | LPERFDLTYI. | HHHHTT--EE. | aaaaalxbbx. |
1o7q_A_115 | 1o7q | A | 121 | 131 | YYAKQKITVGL | HHHHHT--EEE | aaaaalxbbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dgf_A_260 | 1dgf | A | NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | Q - 282 |
1g5h_D_419 | 1g5h | D | MSESELENOMETHIONINE | T - 420 |
1g5h_D_419 | 1g5h | D | MSESELENOMETHIONINE | G - 425 |
1g5h_D_419 | 1g5h | D | MSESELENOMETHIONINE | L - 426 |
1g5h_D_419 | 1g5h | D | MSESELENOMETHIONINE | I - 427 |
1g5h_D_419 | 1g5h | D | MSESELENOMETHIONINE | Q - 428 |
1g5h_D_419 | 1g5h | D | MSESELENOMETHIONINE | L - 429 |
1g5h_D_419 | 1g5h | D | MSESELENOMETHIONINE | R - 430 |
1g5h_D_419 | 1g5h | D | MSESELENOMETHIONINE | S - 431 |
1o7q_A_115 | 1o7q | A | UDPURIDINE-5'-DIPHOSPHATE | V - 133 |
1o7q_A_115 | 1o7q | A | UDPURIDINE-5'-DIPHOSPHATE | F - 134 |
1o7q_A_115 | 1o7q | A | UDPURIDINE-5'-DIPHOSPHATE | A - 135 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1o7q_A_115 | 1o7q | A | AC6UDP BINDING SITE FOR CHAIN A | F - 134 |
1o7q_A_115 | 1o7q | A | AC6UDP BINDING SITE FOR CHAIN A | A - 135 |
Clusters included in this Subclass |
CLUSTER: HE.3.132 |
CLUSTER: HE.4.62 |
CLUSTER: HE.5.63 |
CLUSTER: HE.6.31 |