Information on SUBCLASS 2.2.7 |
Subclass Accession number: 8206
Subclass: 2.2.7 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 13 Average sequence ID (%) : 9.9 +/- 12.2 Average RMSD (Å) : 0.715 +/- 0.234 Consensus geometry
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Consensus Sequence: | XXXpXX |
(φψ)-conformation: | aapabb |
Pattern: | x | [deknqsw] | [afiklm] | [ailmv] | [aeknr] | x | x | [DEKNST] | x | [filmpt] | x | [filtvy] |
Conservation: | -0.273 | -0.471 | 0.417 | 1.308 | 0.840 | -0.895 | -0.719 | 2.214 | -0.837 | -0.591 | -0.079 | -0.914 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bfd_*_187 | 1bfd | - | 194 | 205 | VKALNSASNPAI | HHHHHH-SS-EE | aaaaaaxabxbb |
1dmr_*_171 | 1dmr | - | 172 | 183 | PVLAENTEVMVF | HHHHHH-SEEEE | aaaaaaxabbbb |
1gz0_A_85 | 1gz0 | A | 86 | 97 | PDLIASLDQPFL | HHHHHT-SS-EE | aaaaaababpbb |
1hp1_A_123 | 1hp1 | A | 127 | 138 | RQQEKWAKFPLL | HHHHHH-SS-EE | aaaaaaxabxbb |
1jg7_A_78 | 1jg7 | A | 84 | 95 | QKFMAKYKSKIY | HHHHHH--S-EE | aaaaaaxaxxbx |
1kbl_A_519 | 1kbl | A | 526 | 537 | VWADKFRTLKVR | HHHHHH--SEEE | aaaaaaxaxxbb |
1kxr_A_338 | 1kxr | A | 339 | 350 | RDFIREFTKLEI | HHHHHH--EEEE | aaaaaaxabbbb |
1lii_A_207 | 1lii | A | 211 | 222 | QSLLLHTNILFG | HHHHHT-SEEEE | aaaaaababbbe |
1mdw_A_328 | 1mdw | A | 329 | 340 | SDFLRHYSRLEI | HHHHHH--EEEE | aaaaaaxabbbb |
1ovm_A_192 | 1ovm | A | 203 | 214 | ENKLAMSKRTAL | HHHHHT-S-EEE | aaaaaaxabbbb |
1p77_A_201 | 1p77 | A | 201 | 212 | AEILKLGSAFYD | HHHHHH-S-EEE | aaaaaaxabbbb |
1psw_A_252 | 1psw | A | 256 | 267 | VILIAACKAIVT | HHHHHTSS-EEE | aaaaaaxabbbb |
2sns_*_62 | 2sns | - | 63 | 74 | KKMVENAKKIEV | HHHHHT-S-EEE | aaaaaaxabbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dmr_*_171 | 1dmr | * | PGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE | W - 184 |
1gz0_A_85 | 1gz0 | A | MSESELENOMETHIONINE | L - 85 |
1gz0_A_85 | 1gz0 | A | MSESELENOMETHIONINE | P - 86 |
1gz0_A_85 | 1gz0 | A | MSESELENOMETHIONINE | I - 89 |
1gz0_A_85 | 1gz0 | A | MSESELENOMETHIONINE | F - 96 |
1gz0_A_85 | 1gz0 | A | MSESELENOMETHIONINE | L - 98 |
1gz0_A_85 | 1gz0 | A | MSESELENOMETHIONINE | I - 99 |
1lii_A_207 | 1lii | A | ACPPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER | G - 222 |
1lii_A_207 | 1lii | A | MGMAGNESIUM ION | N - 223 |
1lii_A_207 | 1lii | A | ACPPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER | N - 223 |
1psw_A_252 | 1psw | A | MSESELENOMETHIONINE | L - 258 |
1psw_A_252 | 1psw | A | MSESELENOMETHIONINE | A - 261 |
1psw_A_252 | 1psw | A | MSESELENOMETHIONINE | C - 262 |
1psw_A_252 | 1psw | A | MSESELENOMETHIONINE | K - 263 |
1psw_A_252 | 1psw | A | MSESELENOMETHIONINE | A - 264 |
1psw_A_252 | 1psw | A | MSESELENOMETHIONINE | T - 267 |
1psw_A_252 | 1psw | A | MSESELENOMETHIONINE | N - 268 |
Clusters included in this Subclass |
CLUSTER: HE.3.41 |
CLUSTER: HE.4.224 |