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Information on SUBCLASS 2.3.2
Subclass Accession number: 8226
Subclass: 2.3.2 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 33

Average sequence ID (%) : 12.5 +/- 15.7
Average RMSD (Å) : 0.627 +/- 0.200

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: pXcXhX
(φψ)-conformation: aalabb
Pattern: x[afgilmvwy]x[adeknqrst][adeknqrst][degknqr]x[filmvwy]xx
Conservation:-0.841-0.566-0.5390.641-0.2101.567-0.3311.851-0.820-0.752
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a0c_A_2781a0c   A284293YARINGVLGSHHHHTT-EEEaaaaavaxab
1a0d_A_2761a0d   A282291VARIHGMLGSHHHHTT-EEEaaaaavaxab
1a0e_A_2781a0e   A284293MARILGKLGSHHHHTT-EEEaaaaavaxab
1ajs_A_931ajs   A93102PALQEKRVGGHHHHTT-EEEaaaaalabbb
1aky_*_1861aky   -190199FYKKTGIWAGHHHHHT-EEEaaaaavaxbb
1brm_A_1351brm   A146155GLFANDLVDWHHHTTT-EEEaaaaalaxab
1d3v_A_2541d3v   A263272EIYKTGLLSGHHHHHT-EEEaaaaavapab
1ei9_A_2711ei9   A273282AMDKAGQLVFHHHHTT-EEEaaaaavabbb
1evl_A_2441evl   A247255IGKQLDLYH.HHHHTT-EE.aaaaalabb.
1fa2_A_1671fa2   A168177DFLKAGDIVDHHHHHT-EEEaaaaavaxab
1fy7_A_3811fy7   A387396TAKTLNILRYHHHHHT-EEEaaaaavaxbb
1g19_A_1231g19   A132141MLIRSGALDIHHHHTS-EEEaaaaavaxab
1j8f_A_1471j8f   A154163LLKDKGLLLRHHHHTT-EEEaaaaavaxab
1jms_A_3551jms   A368377FWKQQGLLLYHHHHTT-EEEaaaaavaxab
1kgd_A_7881kgd   A793802QDISNNEYLEHHHHTT-EEEaaaaalabab
1kt8_A_2931kt8   A298307RALEEGRVREHHHHTT-EEEaaaaalaxab
1lgt_A_2181lgt   A227236RVDADGLITSHHHTTT-EEEaaaaavaxab
1lml_*_2741lml   -276285FFEDARIVANHHHHTT-EEEaaaaavabbb
1lox_*_2591lox   -267276KELKAGTLFEHHHHTT-EEEaaaaavaxbb
1lvg_A_581lvg   A6372RDIAAGDFIEHHHHHT-EEEaaaaavabab
1n8j_A_1021n8j   A103111LTRNFDNMR.HHHHTT-EE.aaaaalaxx.
1nuw_A_10721nuw   A10841093VLKSSFATCVHHHHTT-EEEaaaaavabab
1nwc_A_1361nwc   A147156GLFEKDLVEWHHHHTT-EEEaaaaalaxab
1nyr_A_2431nyr   A246255IGKELELFTNHHHHTT-EEEaaaaalabbb
1pja_A_2641pja   A266275TLLARGAIVRHHHHTT-EEEaaaaavaxbx
1poi_A_851poi   A8998KWFEAGKLTMHHHHHT-SEEaaaaavabxb
1pq3_A_2731pq3   A282291EIHNTGLLSAHHHTTT-EEEaaaaavaxab
1q1a_A_951q1a   A102111LFQDKDVLKRHHHHTT-EEEaaaaalaxab
1qf9_A_1561qf9   A162171HYNKFDKVKIHHHHTT-EEEaaaaavabbx
1tmo_*_2051tmo   -214223EKVKQGKIRVHHHHHTSSEEaaaaavabbb
1zin_*_1811zin   -185194FYEQKGYLRNHHHHHT-EEEaaaaavaxbx
2cev_A_2482cev   A257266MLAEAQIITSHHHHHT-EEEaaaaavaxab
2cst_A_932cst   A93102PAIAQKRVGSHHHHTT-EEEaaaaalabbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a0c_A_2781a0c   A     COCOBALT (II) ION D - 295
1a0d_A_2761a0d   A     MNMANGANESE (II) ION D - 293
1ajs_A_931ajs   A     PLA2-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-2-METHYL-SUCCINIC ACID L - 106
1kgd_A_7881kgd   A     FMTFORMIC ACID E - 802
1kgd_A_7881kgd   A     FMTFORMIC ACID Y - 803
1kgd_A_7881kgd   A     FMTFORMIC ACID G - 804
1kt8_A_2931kt8   A     ILPN-[O-PHOSPHONO-PYRIDOXYL]-ISOLEUCINE S - 311
1lgt_A_2181lgt   A     BP32'-CHLORO-BIPHENYL-2,3-DIOL T - 235
1lgt_A_2181lgt   A     FE2FE (II) ION H - 241
1lgt_A_2181lgt   A     BP32'-CHLORO-BIPHENYL-2,3-DIOL H - 241
1lvg_A_581lvg   A     5GPGUANOSINE-5'-MONOPHOSPHATE E - 72
1lvg_A_581lvg   A     5GPGUANOSINE-5'-MONOPHOSPHATE H - 73
1lvg_A_581lvg   A     5GPGUANOSINE-5'-MONOPHOSPHATE A - 74
1lvg_A_581lvg   A     5GPGUANOSINE-5'-MONOPHOSPHATE F - 76
1nuw_A_10721nuw   A     PO3PHOSPHITE ION D - 1074
1nuw_A_10721nuw   A     MGMAGNESIUM ION D - 1074
1pq3_A_2731pq3   A     MNMANGANESE (II) ION V - 295
1pq3_A_2731pq3   A     S2CS-2-(BORONOETHYL)-L-CYSTEINE V - 295
1tmo_*_2051tmo   *     2MDGUANYLATE-O'-PHOSPHORIC ACID MONO-(2-AMINO-5,6-DIMERCAPTO-4-OXO-3,5,6,7,8A,9,10,10A-OCTAHYDRO-4H-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-7-YLMETHYL) ESTER I - 226
2cev_A_2482cev   A     GAIGUANIDINE Y - 248
2cev_A_2482cev   A     GAIGUANIDINE R - 249
2cev_A_2482cev   A     GAIGUANIDINE E - 250
2cev_A_2482cev   A     GAIGUANIDINE H - 252
2cev_A_2482cev   A     GAIGUANIDINE L - 253
2cev_A_2482cev   A     GAIGUANIDINE E - 256
2cev_A_2482cev   A     MNMANGANESE (II) ION V - 270
2cst_A_932cst   A     PLPPYRIDOXAL-5'-PHOSPHATE L - 106
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1a0d_A_2761a0d   A MN1MN BINDING SITE 1 OF MOLECULE AD - 293
1a0e_A_2781a0e   A CO1CO BINDING SITE 1 OF MOLECULE AD - 295
1brm_A_1351brm   A AT1ACTIVE SITE IDENTIFIED FROM MODIFIED CYS.C - 135
1brm_A_1351brm   A AT1ACTIVE SITE IDENTIFIED FROM MODIFIED CYS.Q - 162

Clusters included in this Subclass
CLUSTER: HE.2.25
CLUSTER: HE.2.37
CLUSTER: HE.3.21
CLUSTER: HE.4.76