Logo
Information on SUBCLASS 3.1.5
Subclass Accession number: 8301
Subclass: 3.1.5 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 13

Average sequence ID (%) : 16.3 +/- 19.6
Average RMSD (Å) : 0.854 +/- 0.257

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XXGhXXh
(φψ)-conformation: aagpabb
Pattern: xx[afilmvy][gikltv][ekpqrs]x[aflm]xxx[dgs][cfglvy]xx[agilmvy]
Conservation:-0.506-0.438-0.063-0.8500.740-0.7390.908-0.299-0.654-0.3273.127-0.325-0.485-0.3300.242
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bbu_A_2401bbu   A240254ELYLKRLVVGGFERVHHHHHHHHHTT--EEaaaaaaaaaagxabb
1c0a_A_1951c0a   A195209QLFKQLLMMSGFDRYHHHHHHHHHTT--EEaaaaaaaaaavpabb
1ccw_A_1011ccw   A102116PDVEKRFKDMGYDRVHHHHHHHHHTT-SEEaaaaaaaaaagxabb
1e1o_A_2401e1o   A240254ELYLKRLVVGGFERVHHHHHHHHHHT--EEaaaaaaaaaagxabb
1gsa_*_2491gsa   -256270RQIGPTLKEKGLIFVHHHHHHHHHTT--EEaaaaaaaaaavxabb
1hrk_A_3151hrk   A316330DESIKGLCERGRKNIHHHHHHHHHTT--EEaaaaaaaaaavxabb
1iye_A_1641iye   A168182LLVGSEARRHGYQEGHHHHHHHHHTT-SEEaaaaaaaaaavxabb
1jxh_A_1551jxh   A159173LAQGRALLAMGCEAVHHHHHHHHHTT-SEEaaaaaaaaaagxabb
1l0w_A_2011l0w   A201215QLFKQMLMVAGLDRYHHHHHHHHHTT-SEEaaaaaaaaaavxabb
1lme_A_241lme   A3145ERMIETMYHYDGVGLHHHHHHHHHTT-SEEaaaaaaaaaavxabb
1m7x_A_2651m7x   A270284DQLVPYAKWMGFTHLHHHHHHHHHTT-SEEaaaaaaaaaavxabb
2blt_A_52blt   A1428NTITPLMKAQSVPGMHHHHHHHHHTT-SEEaaaaaaaaaalxabb
3daa_A_1503daa   A153167VLAKQEAHEKGCYEAHHHHHHHHHTT-SEEaaaaaaaaaavxabb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bbu_A_2401bbu   A     LYSLYSINE E - 240
1bbu_A_2401bbu   A     LYSLYSINE K - 244
1bbu_A_2401bbu   A     LYSLYSINE N - 260
1c0a_A_1951c0a   A     AMOASPARTYL-ADENOSINE-5'-MONOPHOSPHATE Q - 195
1c0a_A_1951c0a   A     AMOASPARTYL-ADENOSINE-5'-MONOPHOSPHATE K - 198
1c0a_A_1951c0a   A     AMOASPARTYL-ADENOSINE-5'-MONOPHOSPHATE C - 215
1e1o_A_2401e1o   A     GOLGLYCEROL E - 240
1e1o_A_2401e1o   A     GOLGLYCEROL I - 257
1e1o_A_2401e1o   A     GOLGLYCEROL N - 258
1e1o_A_2401e1o   A     GOLGLYCEROL R - 259
1gsa_*_2491gsa   *     ADPADENOSINE-5'-DIPHOSPHATE D - 273
1gsa_*_2491gsa   *     MGMAGNESIUM ION D - 273
1gsa_*_2491gsa   *     ADPADENOSINE-5'-DIPHOSPHATE I - 275
1iye_A_1641iye   A     PGU4-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-BUTYRIC ACID Y - 164
1iye_A_1641iye   A     PGU4-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-BUTYRIC ACID S - 167
1lme_A_241lme   A     OCSCYSTEINESULFONIC ACID G - 44
3daa_A_1503daa   A     PDA2-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-PROPIONIC ACID A - 152

Clusters included in this Subclass
CLUSTER: HE.3.42
CLUSTER: HE.4.120