Information on SUBCLASS 3.13.1 |
Subclass Accession number: 8369
Subclass: 3.13.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 9 Average sequence ID (%) : 23.6 +/- 28.0 Average RMSD (Å) : 0.811 +/- 0.117 Consensus geometry
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Consensus Sequence: | XhGpXXh |
(φψ)-conformation: | aaeapbb |
Pattern: | [aelm] | x | x | [ilw] | x | [EHKRS] | x | [FIY] | [GN] | [DNST] | x | x | [CFV] | [acfl] |
Conservation: | -0.508 | -0.917 | -0.929 | -0.309 | -0.652 | 0.285 | -0.370 | 1.758 | 2.454 | 0.539 | -0.487 | -0.462 | 0.226 | -0.628 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b6a_*_397 | 1b6a | - | 403 | 416 | LNVINENFGTLAFC | HHHHHHHTTTS-EE | aaaaaaaaeaxxbb |
1bxn_A_389 | 1bxn | A | 389 | 402 | MHQLIHLFGDDVVL | HHHHHHHH-SS-EE | aaaaaaaaeaxbbx |
1cjb_A_47 | 1cjb | A | 58 | 71 | AYDIKKVYNNEEFH | HHHHHHHHTT--EE | aaaaaaaaeaxxbb |
1gg4_A_224 | 1gg4 | A | 224 | 236 | WLNWQSVIGSRKV. | HHHHHHHHTTSEE. | aaaaaaaaeaxxb. |
1gk8_A_387 | 1gk8 | A | 387 | 400 | MPALVEIFGDDACL | HHHHHHHH-SSSEE | aaaaaaaaeaxbbb |
1mtz_A_79 | 1mtz | A | 87 | 100 | EALRSKLFGNEKVF | HHHHHHHHTT--EE | aaaaaaaaeaxxbb |
1rbl_A_387 | 1rbl | A | 387 | 400 | MPALVEIFGDDSVL | HHHHHHHH-SS-EE | aaaaaaaaeaxbbb |
1xgs_A_217 | 1xgs | A | 223 | 236 | LAKIKREYGTLPFA | HHHHHHHTTTS-EE | aaaaaaaaeaxpbx |
8ruc_A_387 | 8ruc | A | 387 | 400 | MPALTEIFGDDSVL | HHHHHHHH-SSSEE | aaaaaaaaeaxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1b6a_*_397 | 1b6a | * | TNP3,5,6,8-TETRAMETHYL-N-METHYL PHENANTHROLINIUM | A - 414 |
1bxn_A_389 | 1bxn | A | PO4PHOSPHATE ION | Q - 403 |
1bxn_A_389 | 1bxn | A | PO4PHOSPHATE ION | F - 404 |
1cjb_A_47 | 1cjb | A | MGMAGNESIUM ION | L - 75 |
1cjb_A_47 | 1cjb | A | IRP(1S)-1(9-DEAZAHYPOXANTHIN-9YL)1,4-DIDEOXY-1,4-IMINO-D-RIBITOL-5-PHOSPHATE | L - 75 |
1cjb_A_47 | 1cjb | A | POPPYROPHOSPHATE 2- | L - 75 |
1cjb_A_47 | 1cjb | A | MGMAGNESIUM ION | L - 76 |
1cjb_A_47 | 1cjb | A | IRP(1S)-1(9-DEAZAHYPOXANTHIN-9YL)1,4-DIDEOXY-1,4-IMINO-D-RIBITOL-5-PHOSPHATE | L - 76 |
1cjb_A_47 | 1cjb | A | POPPYROPHOSPHATE 2- | L - 76 |
1gg4_A_224 | 1gg4 | A | MSESELENOMETHIONINE | W - 224 |
1gg4_A_224 | 1gg4 | A | MSESELENOMETHIONINE | W - 227 |
1gg4_A_224 | 1gg4 | A | MSESELENOMETHIONINE | I - 231 |
1gg4_A_224 | 1gg4 | A | MSESELENOMETHIONINE | V - 236 |
1gk8_A_387 | 1gk8 | A | KCXLYSINE NZ-CARBOXYLIC ACID | Q - 401 |
1gk8_A_387 | 1gk8 | A | CAP2-CARBOXYARABINITOL-1,5-DIPHOSPHATE | Q - 401 |
1rbl_A_387 | 1rbl | A | CBXCARBOXY GROUP | Q - 401 |
Clusters included in this Subclass |
CLUSTER: HE.4.65 |