Information on SUBCLASS 4.2.5 |
Subclass Accession number: 8421
Subclass: 4.2.5 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 12 Average sequence ID (%) : 15.7 +/- 16.9 Average RMSD (Å) : 0.733 +/- 0.227 Consensus geometry
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Consensus Sequence: | XpcXhpXh |
(φψ)-conformation: | aalababb |
Pattern: | x | x | [afilv] | x | [DEHRST] | [DGN] | x | [AILV] | [DEKQRST] | x | [AFILMVY] | [civy] | [afiltv] |
Conservation: | -1.343 | -1.191 | 0.146 | -0.768 | 0.379 | 2.337 | -0.778 | 1.120 | 0.553 | -0.518 | 0.294 | -0.022 | -0.208 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aa6_*_386 | 1aa6 | - | 388 | 400 | HRAAHGEVRAAYI | HHHHTTS--EEEE | aaaaavababbbx |
1b93_A_70 | 1b93 | A | 76 | 88 | ALISEGKIDVLIF | HHHHTT---EEEE | aaaaavababbbb |
1ddg_A_499 | 1ddg | A | 504 | 516 | RYVKEGVLTRIDL | HHHHTTS--EEEE | aaaaavaxabbbb |
1dhs_*_112 | 1dhs | - | 118 | 130 | YLVQHNMVDVLVT | HHHHTT--SEEEE | aaaaalababbbb |
1gnl_A_378 | 1gnl | A | 383 | 395 | DAVKSGAIKKFVV | HHHHTTS--EEEE | aaaaavababbbx |
1gtk_A_63 | 1gtk | A | 68 | 80 | VALLENRADIAVH | HHHHTTS-SEEEE | aaaaavababbbb |
1ja1_A_576 | 1ja1 | A | 581 | 593 | RFHKDGALTQLNV | HHHHTTSSSEEEE | aaaaavababbxb |
1jp4_A_221 | 1jp4 | A | 226 | 238 | IQLIEGKASAYVF | HHHHTTS-SEEEE | aaaaavababbbb |
1jqk_A_322 | 1jqk | A | 322 | 334 | LPILTGALEAMVV | HHHHTT---EEEE | aaaaavababbxb |
1o6z_A_31 | 1o6z | A | 39 | 51 | NIALRDIADEVVF | HHHHTT--SEEEE | aaaaalababbbx |
1oao_A_337 | 1oao | A | 339 | 351 | LAICTGAIDAMCV | HHHTTS--SEEEE | aaaaavaxabbbb |
1oyw_A_272 | 1oyw | A | 280 | 292 | EKFQRDDLQIVVA | HHHHTTS-SEEEE | aaaaavababbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HE.5.324 |
CLUSTER: HE.6.22 |