Information on SUBCLASS 1.1.8 |
Subclass Accession number: 8790
Subclass: 1.1.8 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 20 Average sequence ID (%) : 13.9 +/- 16.8 Average RMSD (Å) : 0.475 +/- 0.148 Consensus geometry
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Consensus Sequence: | XXpXX |
(φψ)-conformation: | aapaa |
Pattern: | x | x | x | x | [dehnqrstw] | [dekpr] | x | x | x |
Conservation: | -0.392 | -0.062 | -0.747 | -0.757 | 0.002 | 2.445 | -0.671 | 0.456 | -0.274 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ab4_*_468 | 1ab4 | - | 490 | 498 | RILGSADRL | HHHH-HHHH | aaaaxaaaa |
1ajs_A_301 | 1ajs | A | 308 | 316 | RTLSDPELF | HHHHSHHHH | aaaabaaaa |
1bs0_A_249 | 1bs0 | A | 255 | 263 | LLQFARHLI | HHHH-HHHH | aaaaxaaaa |
1cza_N_481 | 1cza | N | 496 | 504 | ELGLRKQTH | HHHHSHHHH | aaaaxaaaa |
1d3y_A_303 | 1d3y | A | 312 | 320 | GLKNDDFVR | HHHH-HHHH | aaaaxaaaa |
1dpg_A_188 | 1dpg | A | 191 | 199 | LRFGNPIFD | HHHT-HHHH | aaaabaaaa |
1ea5_A_201 | 1ea5 | A | 208 | 216 | MHILSPGSR | HHHH-HHHH | aaaaxaaaa |
1ezv_F_5 | 1ezv | F | 14 | 22 | YILKSPVLS | HHHHSHHHH | aaaaxaaaa |
1gee_A_197 | 1gee | A | 198 | 206 | EKFADPEQR | HHHHSHHHH | aaaaxaaaa |
1hyo_A_95 | 1hyo | A | 95 | 103 | RLRDDKELR | HHHH-HHHH | aaaaxaaaa |
1inp_*_4 | 1inp | - | 21 | 29 | ACRQQETLF | HHHHSHHHH | aaaaxaaaa |
1j7n_A_210 | 1j7n | A | 222 | 230 | AYYIEPQHR | HHHHSHHHH | aaaaxaaaa |
1jdr_A_233 | 1jdr | A | 237 | 245 | SLIQDPKYL | HHHHSHHHH | aaaaxaaaa |
1ji2_A_481 | 1ji2 | A | 493 | 501 | LRHRLASLT | HHHH-HHHH | aaaabaaaa |
1jqn_A_747 | 1jqn | A | 753 | 761 | MCRDWPFFS | HHHH-HHHH | aaaabaaaa |
1jqo_A_808 | 1jqo | A | 815 | 823 | MYNEWPFFR | HHHH-HHHH | aaaabaaaa |
1n5m_A_204 | 1n5m | A | 211 | 219 | MHILSLPSR | HHHHSHHHH | aaaabaaaa |
1yaa_A_300 | 1yaa | A | 308 | 316 | KLLETPELT | HHHHSHHHH | aaaabaaaa |
5rub_A_423 | 5rub | A | 426 | 434 | YAREHKELA | HHHT-HHHH | aaaabaaaa |
7aat_A_300 | 7aat | A | 308 | 316 | LILNTPELR | HHHH-HHHH | aaaabaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gee_A_197 | 1gee | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | F - 200 |
1jdr_A_233 | 1jdr | A | HEMPROTOPORPHYRIN IX CONTAINING FE | T - 234 |
1jdr_A_233 | 1jdr | A | HEMPROTOPORPHYRIN IX CONTAINING FE | D - 235 |
1jqn_A_747 | 1jqn | A | ASPASPARTIC ACID | M - 769 |
1jqn_A_747 | 1jqn | A | ASPASPARTIC ACID | K - 773 |
Clusters included in this Subclass |
CLUSTER: HH.0.18 |
CLUSTER: HH.0.21 |
CLUSTER: HH.1.34 |
CLUSTER: HH.2.36 |