Information on SUBCLASS 4.1.8 |
Subclass Accession number: 6243
Subclass: 4.1.8 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 22 Average sequence ID (%) : 9.4 +/- 13.4 Average RMSD (Å) : 0.405 +/- 0.189 Consensus geometry
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Consensus Sequence: | XpXXXcXX |
(φψ)-conformation: | bbaaalbb |
Pattern: | x | x | [dehnqs] | x | x | x | x | x | x | [adegknqrst] |
Conservation: | -0.780 | -0.133 | 2.446 | -0.472 | -0.586 | 0.003 | 0.968 | -0.829 | -0.385 | -0.232 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bjn_A_151 | 1bjn | A | 151 | 158 | .NETIDGIA. | .EETTTTEE. | .bxaaavbb. |
1bk1_*_16 | 1bk1 | - | 18 | 27 | TYDESAGTFS | EEEGGGTEEE | bbbaaavbbb |
1bt4_A_151 | 1bt4 | A | 151 | 158 | .NETIEGAQ. | .EETTTTEE. | .bxaaavbb. |
1cyx_*_172 | 1cyx | - | 174 | 183 | FFIPRLGSQI | EEEGGGTEEE | xbbaaalbbb |
1ewq_A_143 | 1ewq | A | 147 | 156 | FLDVSTGEFK | EEETTTTEEE | bbbaaavpbb |
1fm4_A_66 | 1fm4 | A | 73 | 82 | EVDHTNFKYN | EEETTTTEEE | bbbaaalbbb |
1frd_*_2 | 1frd | - | 7 | 16 | LINKKQDIDT | EEETTTTEEE | bbbaaalbbb |
1icx_A_63 | 1icx | A | 72 | 81 | AIDEANLTYN | EEEGGGTEEE | bbbaaalbbb |
1ifv_A_65 | 1ifv | A | 72 | 81 | AIDEASFEYN | EEETTTTEEE | bbbaaalbbb |
1izn_A_151 | 1izn | A | 162 | 171 | QFQPKNFWNG | EEEGGGTEEE | bbbaaalbbb |
1ji1_A_555 | 1ji1 | A | 560 | 569 | ITDDTNKIYS | EEETTTTEEE | bbbaaalbbb |
1ji2_A_504 | 1ji2 | A | 509 | 518 | HADKQANLYA | EEETTTTEEE | bbbaaalbbb |
1ksi_A_254 | 1ksi | A | 262 | 271 | IYDLEKHKSR | EEETTTTEEE | bxxaaalbxb |
1l3a_A_200 | 1l3a | A | 207 | 216 | VQNKLINLDE | EEEGGGTEEE | bbbaaalxbb |
1lcy_A_28 | 1lcy | A | 35 | 44 | DRHPFLGREV | EEETTTTEEE | xxbaaalbbb |
1m56_B_217 | 1m56 | B | 219 | 228 | WTVPAFGVKQ | EEEGGGTEEE | bbbaaavbbb |
1n0u_A_209 | 1n0u | A | 211 | 220 | FGSGLHGWAF | EEETTTTEEE | bbbaaagbbb |
1n0x_H_46 | 1n0x | H | 50 | 59 | WINPYNGNKE | EE-TTT--EE | bbxaaavxbb |
1qd6_C_206 | 1qd6 | C | 213 | 222 | QYNWNTGYGG | EE-TTT--EE | bbxaaavxbb |
1su4_A_478 | 1su4 | A | 486 | 495 | EFSRDRKSMS | EEETTTTEEE | pxbaaalbbb |
1uwc_A_35 | 1uwc | A | 41 | 50 | IYNAQTDING | EEETTTTEEE | bbbaaalxbb |
1ux2_A_27 | 1ux2 | A | 40 | 49 | EVNEITNEVD | EEETTTTEEE | bbbaaalbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1uwc_A_35 | 1uwc | A | AC3NAG BINDING SITE FOR CHAIN B | N - 43 |
1ux2_A_27 | 1ux2 | A | BC2EPE BINDING SITE FOR CHAIN E | W - 53 |
Clusters included in this Subclass |
CLUSTER: HA.3.43 |
CLUSTER: HA.5.34 |