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Information on SUBCLASS 0.1.9
Subclass Accession number: 5196
Subclass: 0.1.9 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 19

Average sequence ID (%) : 13.3 +/- 19.5
Average RMSD (Å) : 0.563 +/- 0.134

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 45-90 rho (°): 90-135
Consensus Sequence: ppXX
(φψ)-conformation: aabb
Pattern: [agiltv][adekqrst]xx[ehknqrst][HKNQS]x[adegps][fhlmvw]xx
Conservation:-0.4470.580-1.1830.2140.5332.371-1.2830.247-0.381-0.173-0.479
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ehw_A_611ehw   A6575IRYMSSGPVVAHHHHTSS-EEEaaaaaabxbbb
1elj_A_3201elj   A326334GQAVQHAYL..HHHHHT-EE..aaaaaaxxx..
1fx2_A_10751fx2   A10751085AEDRKQIDVTAHHHHHT--EEEaaaaaabbbbx
1fx4_A_10631fx4   A10631073GEDRNQLDVTTHHHHHTS-EEEaaaaaabbbbx
1hlw_A_651hlw   A6979VSFITSGPVVAHHHHTSS-EEEaaaaaabxbbx
1hyu_A_2021hyu   A204214AEALNKRDAYDHHHHHTS--EEaaaaaaxxxxa
1jmt_A_1201jmt   A127135VIDLNNRWF..HHHHTT-EE..aaaaaabbb..
1js8_A_27791js8   A27862796LKEIQHEDRVFHHHHTTS-EEEaaaaaabxbbb
1m3y_A_2131m3y   A216226RTRFAQLPHEYHHHHHHS-EEEaaaaaaxxbbb
1m7g_A_141m7g   A1828TELRNQRGLTIHHHHTSS-EEEaaaaaabxbbb
1mnn_A_1271mnn   A127137LDTFLKSSFDLHHHHHHS-EEEaaaaaaxbbbx
1nhk_L_601nhk   L6474VQFMISGPVVLHHHHTSS-EEEaaaaaabxbbx
1nue_A_611nue   A6575VKYMNSGPVVAHHHHHSS-EEEaaaaaabxbbx
1o4w_A_621o4w   A7281LKLLEHFEVV.HHHHTTSEEE.aaaaaabxbb.
1qo7_A_741qo7   A7888EARLNSFPQFTHHHHTTS-EEEaaaaaabwbbb
1scz_A_1821scz   A192202LEAKNSTAMLTHHHHTTS-EEEaaaaaabbxbb
1ucn_A_611ucn   A6575VKYMHSGPVVAHHHHHSS-EEEaaaaaabxbbx
2stv_*_132stv   -1828RMINTHLEHKRHHHHTTS-EEEaaaaaaxxxxb
3pvi_A_883pvi   A91101IAKYRQVPWIFHHHHHTS-EEEaaaaaabxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1hyu_A_2021hyu   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 218
1jmt_A_1201jmt   A     HEZHEXANE-1,6-DIOL D - 129
1jmt_A_1201jmt   A     HEZHEXANE-1,6-DIOL N - 132
1jmt_A_1201jmt   A     HEZHEXANE-1,6-DIOL R - 133
1nhk_L_601nhk   L     CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE L - 63
1nhk_L_601nhk   L     CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE M - 67
1nue_A_611nue   A     GDPGUANOSINE-5'-DIPHOSPHATE L - 64
1nue_A_611nue   A     GDPGUANOSINE-5'-DIPHOSPHATE Y - 67
1o4w_A_621o4w   A     MSESELENOMETHIONINE E - 64
1o4w_A_621o4w   A     MSESELENOMETHIONINE K - 65
1o4w_A_621o4w   A     MSESELENOMETHIONINE A - 67
1o4w_A_621o4w   A     MSESELENOMETHIONINE A - 68
1o4w_A_621o4w   A     MSESELENOMETHIONINE A - 71
1ucn_A_611ucn   A     ADPADENOSINE-5'-DIPHOSPHATE L - 64
1ucn_A_611ucn   A     ADPADENOSINE-5'-DIPHOSPHATE Y - 67
1ucn_A_611ucn   A     PO4PHOSPHATE ION M - 68
2stv_*_132stv   *     CACALCIUM ION E - 25
2stv_*_132stv   *     CACALCIUM ION K - 27

Clusters included in this Subclass
CLUSTER: HE.3.30
CLUSTER: HE.4.79